Difference between revisions of "YJRWTy1-1"

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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases'''          ||''Ty1''
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type'''          || retrotransposon[[Category:retrotransposon]]
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type'''          || retrotransposon[[Category:retrotransposon]]
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'''Description of YJRWTy1-1:''' Long Terminal Repeat (LTR) retrotransposon of the Copia (Pseudoviridae) group; contains co-transcribed genes TYA Gag and TYB Pol, encoding proteins involved in structure and function of virus-like particles, flanked by two direct repeats<ref name='S000113972'>Boeke JD and Devine SE (1998) Yeast retrotransposons: finding a nice quiet neighborhood. Cell 93(7):1087-9 {{SGDpaper|S000113972}} PMID 9657139</ref><ref name='S000072465'>Kim JM, et al. (1998) Transposable elements and genome organization: a comprehensive survey of retrotransposons revealed by the complete Saccharomyces cerevisiae genome sequence. Genome Res 8(5):464-78 {{SGDpaper|S000072465}} PMID 9582191</ref><ref name='S000086174'>Lesage P and Todeschini AL (2005) Happy together: the life and times of Ty retrotransposons and their hosts. Cytogenet Genome Res 110(1-4):70-90 {{SGDpaper|S000086174}} PMID 16093660</ref><ref name='S000059743'>Wilhelm M, et al. (1994) Yeast Ty1 retrotransposon: the minus-strand primer binding site and a cis-acting domain of the Ty1 RNA are both important for packaging of primer tRNA inside virus-like particles. Nucleic Acids Res 22(22):4560-5
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'''Description of YJRWTy1-1:''' Ty1 element, LTR retrotransposon of the Copia (Pseudoviridae) group; contains co-transcribed genes TYA Gag and TYB Pol, encoding proteins involved in structure and function of virus-like particles, flanked by two direct repeats<ref name='S000113972'>Boeke JD and Devine SE (1998) Yeast retrotransposons: finding a nice quiet neighborhood. Cell 93(7):1087-9 {{SGDpaper|S000113972}} PMID 9657139</ref><ref name='S000072465'>Kim JM, et al. (1998) Transposable elements and genome organization: a comprehensive survey of retrotransposons revealed by the complete Saccharomyces cerevisiae genome sequence. Genome Res 8(5):464-78 {{SGDpaper|S000072465}} PMID 9582191</ref><ref name='S000086174'>Lesage P and Todeschini AL (2005) Happy together: the life and times of Ty retrotransposons and their hosts. Cytogenet Genome Res 110(1-4):70-90 {{SGDpaper|S000086174}} PMID 16093660</ref><ref name='S000059743'>Wilhelm M, et al. (1994) Yeast Ty1 retrotransposon: the minus-strand primer binding site and a cis-acting domain of the Ty1 RNA are both important for packaging of primer tRNA inside virus-like particles. Nucleic Acids Res 22(22):4560-5
 
  {{SGDpaper|S000059743}} PMID 7527135</ref>
 
  {{SGDpaper|S000059743}} PMID 7527135</ref>
 
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Latest revision as of 14:05, 4 September 2012

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Systematic name YJRWTy1-1
Gene name
Aliases Ty1
Feature type retrotransposon
Coordinates Chr X:472463..478384
Primary SGDID S000007048


Description of YJRWTy1-1: Ty1 element, LTR retrotransposon of the Copia (Pseudoviridae) group; contains co-transcribed genes TYA Gag and TYB Pol, encoding proteins involved in structure and function of virus-like particles, flanked by two direct repeats[1][2][3][4]




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References

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  1. Boeke JD and Devine SE (1998) Yeast retrotransposons: finding a nice quiet neighborhood. Cell 93(7):1087-9 SGD PMID 9657139
  2. Kim JM, et al. (1998) Transposable elements and genome organization: a comprehensive survey of retrotransposons revealed by the complete Saccharomyces cerevisiae genome sequence. Genome Res 8(5):464-78 SGD PMID 9582191
  3. Lesage P and Todeschini AL (2005) Happy together: the life and times of Ty retrotransposons and their hosts. Cytogenet Genome Res 110(1-4):70-90 SGD PMID 16093660
  4. Wilhelm M, et al. (1994) Yeast Ty1 retrotransposon: the minus-strand primer binding site and a cis-acting domain of the Ty1 RNA are both important for packaging of primer tRNA inside virus-like particles. Nucleic Acids Res 22(22):4560-5 SGD PMID 7527135

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