Difference between revisions of "tA(AGC)F"

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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000006511 tA(AGC)F]  
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000006511 tA(AGC)F]  
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||'' ''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||'' ''
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
|nowrap| Chr VI:204984..204912
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|nowrap| Chr VI:204996..204924
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''          || S000006511
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''          || S000006511
 
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'''Description of tA(AGC)F:''' tRNA-Ala (Ala1), one of 11 nuclear tRNA genes containing the tDNA-anticodon AGC (converted to IGC in the mature tRNA), decodes GCU and GCC codons into alanine, one of 16 nuclear tRNAs for alanine<ref name='S000073095'>Hani J and Feldmann H (1998) tRNA genes and retroelements in the yeast genome. Nucleic Acids Res 26(3):689-96 {{SGDpaper|S000073095}} PMID 9443958</ref><ref name='S000073094'>Percudani R, et al. (1997) Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae. J Mol Biol 268(2):322-30
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'''Description of tA(AGC)F:''' Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis; one of 11 nuclear tRNA genes containing the tDNA-anticodon AGC (converted to IGC in the mature tRNA), decodes GCU and GCC codons into alanine, one of 16 nuclear tRNAs for alanine<ref name='S000147623'>Chan PP and Lowe TM (2009) GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Nucleic Acids Res 37(Database issue):D93-7 {{SGDpaper|S000147623}} PMID 18984615</ref><ref name='S000073095'>Hani J and Feldmann H (1998) tRNA genes and retroelements in the yeast genome. Nucleic Acids Res 26(3):689-96 {{SGDpaper|S000073095}} PMID 9443958</ref><ref name='S000073094'>Percudani R, et al. (1997) Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae. J Mol Biol 268(2):322-30
 
  {{SGDpaper|S000073094}} PMID 9159473</ref>
 
  {{SGDpaper|S000073094}} PMID 9159473</ref>
 
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Latest revision as of 07:45, 23 January 2012

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Systematic name tA(AGC)F
Gene name
Aliases
Feature type tRNA
Coordinates Chr VI:204996..204924
Primary SGDID S000006511


Description of tA(AGC)F: Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis; one of 11 nuclear tRNA genes containing the tDNA-anticodon AGC (converted to IGC in the mature tRNA), decodes GCU and GCC codons into alanine, one of 16 nuclear tRNAs for alanine[1][2][3]




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References

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  1. Chan PP and Lowe TM (2009) GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Nucleic Acids Res 37(Database issue):D93-7 SGD PMID 18984615
  2. Hani J and Feldmann H (1998) tRNA genes and retroelements in the yeast genome. Nucleic Acids Res 26(3):689-96 SGD PMID 9443958
  3. Percudani R, et al. (1997) Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae. J Mol Biol 268(2):322-30 SGD PMID 9159473

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