Difference between revisions of "YOR377W"
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http:// | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000005904 YOR377W] |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''ATF1 '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''ATF1 '' | ||
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | ||
| − | |nowrap| Chr XV: | + | |nowrap| Chr XV:1046226..1047803 |
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| − | | | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000005904 |
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| − | '''Description of | + | '''Description of YOR377W:''' Alcohol acetyltransferase with potential roles in lipid and sterol metabolism; responsible for the major part of volatile acetate ester production during fermentation<ref name='S000048977'>Fujii T, et al. (1994) Molecular cloning, sequence analysis, and expression of the yeast alcohol acetyltransferase gene. Appl Environ Microbiol 60(8):2786-92 {{SGDpaper|S000048977}} PMID 8085822</ref><ref name='S000061763'>Mason AB and Dufour JP (2000) Alcohol acetyltransferases and the significance of ester synthesis in yeast. Yeast 16(14):1287-98 {{SGDpaper|S000061763}} PMID 11015726</ref><ref name='S000074104'>Verstrepen KJ, et al. (2003) Expression levels of the yeast alcohol acetyltransferase genes ATF1, Lg-ATF1, and ATF2 control the formation of a broad range of volatile esters. Appl Environ Microbiol 69(9):5228-37 |
| − | {{SGDpaper| | + | {{SGDpaper|S000074104}} PMID 12957907</ref> |
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| + | ==Community Commentary== | ||
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=== Interactions === | === Interactions === | ||
[[Category:Topic:Interactions]] | [[Category:Topic:Interactions]] | ||
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[[Category:Topic:Interactions:Genetic]] | [[Category:Topic:Interactions:Genetic]] | ||
| − | '''Strain Background''': S288C, W303, industrial<br> | + | '''Strain Background''': S288C, W303 (''see [[CommunityW303.html|detailed notes]] from Rodney Rothstein and Stephan Bartsch for the W303 strain used in the study''), industrial<br> |
Genetic interaction with TPK2, TPK3 [[Category:Genetic Interactions with TPK2, TPK3]]<br>'''Mutation type(s)''': deletion/partial inactivating | Genetic interaction with TPK2, TPK3 [[Category:Genetic Interactions with TPK2, TPK3]]<br>'''Mutation type(s)''': deletion/partial inactivating | ||
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| − | '''Strain Background''': S288C, W303, industrial<br> | + | '''Strain Background''': S288C, W303 (''see [[CommunityW303.html|detailed notes]] from Rodney Rothstein and Stephan Bartsch for the W303 strain used in the study''), industrial<br> |
Genetic interaction with TPK1 [[Category:Genetic Interactions with TPK1]]<br>'''Mutation type(s)''': deletion/partial inactivating | Genetic interaction with TPK1 [[Category:Genetic Interactions with TPK1]]<br>'''Mutation type(s)''': deletion/partial inactivating | ||
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| + | Specifically higher expression in carbon limited chemostat cultures versus carbon excess. | ||
| + | <ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. | ||
| + | J Biol Chem 278(5):3265-74</ref> | ||
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==References== | ==References== | ||
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Latest revision as of 06:45, 23 January 2012
Share your knowledge...Edit this entry! <protect>
| Systematic name | YOR377W |
| Gene name | ATF1 |
| Aliases | |
| Feature type | ORF, Verified |
| Coordinates | Chr XV:1046226..1047803 |
| Primary SGDID | S000005904 |
Description of YOR377W: Alcohol acetyltransferase with potential roles in lipid and sterol metabolism; responsible for the major part of volatile acetate ester production during fermentation[1][2][3]
</protect>
Community Commentary
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Interactions
Genetic
Strain Background: S288C, W303 (see detailed notes from Rodney Rothstein and Stephan Bartsch for the W303 strain used in the study), industrial
Genetic interaction with TPK2, TPK3
Mutation type(s): deletion/partial inactivating
ATF1 is transcriptionally induced by glucose and sucrose. This regulation depends on Ras/cAMP/PKA signaling. Long-term expression of ATF1 requires both a fermentable carbon source and a nitrogen source. This regulation depends on FGM signaling. [4] [5]
Strain Background: S288C, W303 (see detailed notes from Rodney Rothstein and Stephan Bartsch for the W303 strain used in the study), industrial
Genetic interaction with TPK1
Mutation type(s): deletion/partial inactivating
ATF1 is transcriptionally induced by glucose and sucrose. This regulation depends on Ras/cAMP/PKA signaling. Long-term expression of ATF1 requires both a fermentable carbon source and a nitrogen source. This regulation depends on FGM signaling. [4] [6]
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References
See Help:References on how to add references
- ↑ Fujii T, et al. (1994) Molecular cloning, sequence analysis, and expression of the yeast alcohol acetyltransferase gene. Appl Environ Microbiol 60(8):2786-92 SGD PMID 8085822
- ↑ Mason AB and Dufour JP (2000) Alcohol acetyltransferases and the significance of ester synthesis in yeast. Yeast 16(14):1287-98 SGD PMID 11015726
- ↑ Verstrepen KJ, et al. (2003) Expression levels of the yeast alcohol acetyltransferase genes ATF1, Lg-ATF1, and ATF2 control the formation of a broad range of volatile esters. Appl Environ Microbiol 69(9):5228-37 SGD PMID 12957907
- ↑ 4.0 4.1 Verstrepen KJ, et al. (2003) The Saccharomyces cerevisiae alcohol acetyl transferase gene ATF1 is a target of the cAMP/PKA and FGM nutrient-signalling pathways. FEMS Yeast Res 4(3):285-96 SGD PMID 14654433
- ↑ submitted by Kevin J Verstrepen on 2004-03-11
- ↑ submitted by Kevin J Verstrepen on 2004-03-04
See Help:Categories on how to add the wiki page for this gene to a Category </protect> <protect>
References
See Help:References on how to add references
See Help:Categories on how to add the wiki page for this gene to a Category </protect>
