Difference between revisions of "YOR180C"

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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000005706 YOR180C]  
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000005706 YOR180C]  
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''DCI1 ''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''DCI1 ''
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
|nowrap| Chr XV:675168..674353
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|nowrap| Chr XV:675167..674352
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''          || S000005706
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''          || S000005706
 
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'''Description of YOR180C:''' Peroxisomal delta(3,5)-delta(2,4)-dienoyl-CoA isomerase, involved in fatty acid metabolism, contains peroxisome targeting signals at amino and carboxy termini<ref name='S000051780'>Gurvitz A, et al. (1999) Alternatives to the isomerase-dependent pathway for the beta-oxidation of oleic acid are dispensable in Saccharomyces cerevisiae. Identification of YOR180c/DCI1 encoding peroxisomal delta(3,5)-delta(2,4)-dienoyl-CoA isomerase. J Biol Chem 274(35):24514-21 {{SGDpaper|S000051780}} PMID 10455114</ref><ref name='S000050692'>Geisbrecht BV, et al. (1999) Preliminary characterization of Yor180Cp: identification of a novel peroxisomal protein of saccharomyces cerevisiae involved in fatty acid metabolism. Biochem Biophys Res Commun 260(1):28-34 {{SGDpaper|S000050692}} PMID 10381339</ref><ref name='S000046616'>Karpichev IV and Small GM (2000) Evidence for a novel pathway for the targeting of a Saccharomyces cerevisiae peroxisomal protein belonging to the isomerase/hydratase family. J Cell Sci 113 ( Pt 3):533-44
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'''Description of YOR180C:''' Peroxisomal protein; identification as a delta(3,5)-delta(2,4)-dienoyl-CoA isomerase involved in fatty acid metabolism is disputed<ref name='S000050692'>Geisbrecht BV, et al. (1999) Preliminary characterization of Yor180Cp: identification of a novel peroxisomal protein of saccharomyces cerevisiae involved in fatty acid metabolism. Biochem Biophys Res Commun 260(1):28-34 {{SGDpaper|S000050692}} PMID 10381339</ref><ref name='S000051780'>Gurvitz A, et al. (1999) Alternatives to the isomerase-dependent pathway for the beta-oxidation of oleic acid are dispensable in Saccharomyces cerevisiae. Identification of YOR180c/DCI1 encoding peroxisomal delta(3,5)-delta(2,4)-dienoyl-CoA isomerase. J Biol Chem 274(35):24514-21 {{SGDpaper|S000051780}} PMID 10455114</ref><ref name='S000046616'>Karpichev IV and Small GM (2000) Evidence for a novel pathway for the targeting of a Saccharomyces cerevisiae peroxisomal protein belonging to the isomerase/hydratase family. J Cell Sci 113 ( Pt 3):533-44 {{SGDpaper|S000046616}} PMID 10639339</ref><ref name='S000131935'>Ntamack AG, et al. (2009) Oleate beta-oxidation in yeast involves thioesterase but not Yor180c protein that is not a dienoyl-CoA isomerase. Biochim Biophys Acta 1791(5):371-8
  {{SGDpaper|S000046616}} PMID 10639339</ref>
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  {{SGDpaper|S000131935}} PMID 19830908</ref>
 
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Latest revision as of 06:45, 23 January 2012

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Systematic name YOR180C
Gene name DCI1
Aliases ECI2
Feature type ORF, Verified
Coordinates Chr XV:675167..674352
Primary SGDID S000005706


Description of YOR180C: Peroxisomal protein; identification as a delta(3,5)-delta(2,4)-dienoyl-CoA isomerase involved in fatty acid metabolism is disputed[1][2][3][4]




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DNA and RNA Details

Other DNA and RNA Details

Other Topic: expression

Specifically higher expression in carbon limited chemostat cultures versus carbon excess. [5] [6]





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References

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  1. Geisbrecht BV, et al. (1999) Preliminary characterization of Yor180Cp: identification of a novel peroxisomal protein of saccharomyces cerevisiae involved in fatty acid metabolism. Biochem Biophys Res Commun 260(1):28-34 SGD PMID 10381339
  2. Gurvitz A, et al. (1999) Alternatives to the isomerase-dependent pathway for the beta-oxidation of oleic acid are dispensable in Saccharomyces cerevisiae. Identification of YOR180c/DCI1 encoding peroxisomal delta(3,5)-delta(2,4)-dienoyl-CoA isomerase. J Biol Chem 274(35):24514-21 SGD PMID 10455114
  3. Karpichev IV and Small GM (2000) Evidence for a novel pathway for the targeting of a Saccharomyces cerevisiae peroxisomal protein belonging to the isomerase/hydratase family. J Cell Sci 113 ( Pt 3):533-44 SGD PMID 10639339
  4. Ntamack AG, et al. (2009) Oleate beta-oxidation in yeast involves thioesterase but not Yor180c protein that is not a dienoyl-CoA isomerase. Biochim Biophys Acta 1791(5):371-8 SGD PMID 19830908
  5. Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. J Biol Chem 278(5):3265-74 SGD PMID 12414795
  6. submitted by Viktor Boer on 2003-07-25

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