Difference between revisions of "YOL115W"

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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000005475 YOL115W]  
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000005475 YOL115W]  
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''PAP2 ''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''PAP2 ''
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'''Description of YOL115W:''' Catalytic subunit of TRAMP (Trf4/Pap2p-Mtr4p-Air1p/2p), a nuclear poly (A) polymerase complex involved in RNA quality control; catalyzes polyadenylation of unmodified tRNAs, and snoRNA and rRNA precursors; disputed role as a DNA polymerase<ref name='S000081864'>Wyers F, et al. (2005) Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase. Cell 121(5):725-37 {{SGDpaper|S000081864}} PMID 15935759</ref><ref name='S000081843'>LaCava J, et al. (2005) RNA degradation by the exosome is promoted by a nuclear polyadenylation complex. Cell 121(5):713-24 {{SGDpaper|S000081843}} PMID 15935758</ref><ref name='S000081438'>Vanacova S, et al. (2005) A new yeast poly(A) polymerase complex involved in RNA quality control. PLoS Biol 3(6):e189 {{SGDpaper|S000081438}} PMID 15828860</ref><ref name='S000081293'>Saitoh S, et al. (2002) Cid13 is a cytoplasmic poly(A) polymerase that regulates ribonucleotide reductase mRNA. Cell 109(5):563-73 {{SGDpaper|S000081293}} PMID 12062100</ref><ref name='S000069232'>Wang Z, et al. (2002) Structure/function analysis of the Saccharomyces cerevisiae Trf4/Pol sigma DNA polymerase. Genetics 160(2):381-91 {{SGDpaper|S000069232}} PMID 11861546</ref><ref name='S000055910'>Wang Z, et al. (2000) Pol kappa: A DNA polymerase required for sister chromatid cohesion. Science 289(5480):774-9
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'''Description of YOL115W:''' Non-canonical poly(A) polymerase, involved in nuclear RNA degradation as a component of the TRAMP complex; catalyzes polyadenylation of hypomodified tRNAs, and snoRNA and rRNA precursors; overlapping but non-redundant functions with Trf5p<ref name='S000124622'>Gellon L, et al. (2008) Intrinsic 5'-deoxyribose-5-phosphate lyase activity in Saccharomyces cerevisiae Trf4 protein with a possible role in base excision DNA repair. DNA Repair (Amst) 7(2):187-98 {{SGDpaper|S000124622}} PMID 17983848</ref><ref name='S000081843'>LaCava J, et al. (2005) RNA degradation by the exosome is promoted by a nuclear polyadenylation complex. Cell 121(5):713-24 {{SGDpaper|S000081843}} PMID 15935758</ref><ref name='S000081438'>Vanacova S, et al. (2005) A new yeast poly(A) polymerase complex involved in RNA quality control. PLoS Biol 3(6):e189 {{SGDpaper|S000081438}} PMID 15828860</ref><ref name='S000081864'>Wyers F, et al. (2005) Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase. Cell 121(5):725-37
  {{SGDpaper|S000055910}} PMID 10926539</ref>
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  {{SGDpaper|S000081864}} PMID 15935759</ref>
 
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Latest revision as of 06:45, 23 January 2012

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Systematic name YOL115W
Gene name PAP2
Aliases TRF4
Feature type ORF, Verified
Coordinates Chr XV:101475..103229
Primary SGDID S000005475


Description of YOL115W: Non-canonical poly(A) polymerase, involved in nuclear RNA degradation as a component of the TRAMP complex; catalyzes polyadenylation of hypomodified tRNAs, and snoRNA and rRNA precursors; overlapping but non-redundant functions with Trf5p[1][2][3][4]




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References

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  1. Gellon L, et al. (2008) Intrinsic 5'-deoxyribose-5-phosphate lyase activity in Saccharomyces cerevisiae Trf4 protein with a possible role in base excision DNA repair. DNA Repair (Amst) 7(2):187-98 SGD PMID 17983848
  2. LaCava J, et al. (2005) RNA degradation by the exosome is promoted by a nuclear polyadenylation complex. Cell 121(5):713-24 SGD PMID 15935758
  3. Vanacova S, et al. (2005) A new yeast poly(A) polymerase complex involved in RNA quality control. PLoS Biol 3(6):e189 SGD PMID 15828860
  4. Wyers F, et al. (2005) Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase. Cell 121(5):725-37 SGD PMID 15935759

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