Difference between revisions of "YJL087C"
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http:// | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000003623 YJL087C] |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''TRL1 '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''TRL1 '' | ||
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | ||
| − | |nowrap| Chr X: | + | |nowrap| Chr X:272485..270002 |
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| − | | | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000003623 |
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| − | '''Description of | + | '''Description of YJL087C:''' tRNA ligase, required for tRNA splicing and for both splicing and translation of HAC1 mRNA in the UPR; has phosphodiesterase, polynucleotide kinase, and ligase activities; localized at the inner nuclear envelope and partially to polysomes<ref name='S000057073'>Clark MW and Abelson J (1987) The subnuclear localization of tRNA ligase in yeast. J Cell Biol 105(4):1515-26 {{SGDpaper|S000057073}} PMID 3312232</ref><ref name='S000136483'>Mori T, et al. (2010) Dual Functions of Yeast tRNA Ligase in the Unfolded Protein Response: Unconventional Cytoplasmic Splicing of HAC1 Pre-mRNA Is Not Sufficient to Release Translational Attenuation. Mol Biol Cell 21(21):3722-34 {{SGDpaper|S000136483}} PMID 20844078</ref><ref name='S000056811'>Xu Q, et al. (1990) Domain structure in yeast tRNA ligase. Biochemistry 29(26):6132-8 |
{{SGDpaper|S000056811}} PMID 2207062</ref> | {{SGDpaper|S000056811}} PMID 2207062</ref> | ||
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==Community Commentary== | ==Community Commentary== | ||
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| + | Specifically higher expression in carbon limited chemostat cultures versus carbon excess. | ||
| + | <ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. | ||
| + | J Biol Chem 278(5):3265-74</ref> | ||
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==References== | ==References== | ||
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Latest revision as of 06:45, 23 January 2012
Share your knowledge...Edit this entry! <protect>
| Systematic name | YJL087C |
| Gene name | TRL1 |
| Aliases | LIG1, RLG1 |
| Feature type | ORF, Verified |
| Coordinates | Chr X:272485..270002 |
| Primary SGDID | S000003623 |
Description of YJL087C: tRNA ligase, required for tRNA splicing and for both splicing and translation of HAC1 mRNA in the UPR; has phosphodiesterase, polynucleotide kinase, and ligase activities; localized at the inner nuclear envelope and partially to polysomes[1][2][3]
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References
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- ↑ Clark MW and Abelson J (1987) The subnuclear localization of tRNA ligase in yeast. J Cell Biol 105(4):1515-26 SGD PMID 3312232
- ↑ Mori T, et al. (2010) Dual Functions of Yeast tRNA Ligase in the Unfolded Protein Response: Unconventional Cytoplasmic Splicing of HAC1 Pre-mRNA Is Not Sufficient to Release Translational Attenuation. Mol Biol Cell 21(21):3722-34 SGD PMID 20844078
- ↑ Xu Q, et al. (1990) Domain structure in yeast tRNA ligase. Biochemistry 29(26):6132-8 SGD PMID 2207062
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