Difference between revisions of "YER112W"

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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=YER112W YER112W]  
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000000914 YER112W]  
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''LSM4 ''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''LSM4 ''
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
|nowrap| Chr V:387228..387791
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|nowrap| Chr V:387232..387795
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''          || S000000914
 
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'''Description of {{PAGENAME}}:''' Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA<ref name='S000082016'>Beggs JD (2005) Lsm proteins and RNA processing. Biochem Soc Trans 33(Pt 3):433-8 {{SGDpaper|S000082016}} PMID 15916535</ref><ref name='S000079877'>Kufel J, et al. (2004) Nuclear pre-mRNA decapping and 5' degradation in yeast require the Lsm2-8p complex. Mol Cell Biol 24(21):9646-57 {{SGDpaper|S000079877}} PMID 15485930</ref><ref name='S000062145'>He W and Parker R (2000) Functions of Lsm proteins in mRNA degradation and splicing. Curr Opin Cell Biol 12(3):346-50
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'''Description of YER112W:''' Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA<ref name='S000082016'>Beggs JD (2005) Lsm proteins and RNA processing. Biochem Soc Trans 33(Pt 3):433-8 {{SGDpaper|S000082016}} PMID 15916535</ref><ref name='S000062145'>He W and Parker R (2000) Functions of Lsm proteins in mRNA degradation and splicing. Curr Opin Cell Biol 12(3):346-50 {{SGDpaper|S000062145}} PMID 10801455</ref><ref name='S000079877'>Kufel J, et al. (2004) Nuclear pre-mRNA decapping and 5' degradation in yeast require the Lsm2-8p complex. Mol Cell Biol 24(21):9646-57
  {{SGDpaper|S000062145}} PMID 10801455</ref>
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  {{SGDpaper|S000079877}} PMID 15485930</ref>
 
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==Community Commentary==
 
==Community Commentary==
 
{{CommentaryHelp}}
 
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<!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation -->
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<!--
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Specifically higher expression in carbon limited chemostat cultures versus carbon excess.
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<ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur.
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J Biol Chem 278(5):3265-74</ref>
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Latest revision as of 06:45, 23 January 2012

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Systematic name YER112W
Gene name LSM4
Aliases SDB23, USS1
Feature type ORF, Verified
Coordinates Chr V:387232..387795
Primary SGDID S000000914


Description of YER112W: Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA[1][2][3]




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Community Commentary

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References

See Help:References on how to add references

  1. Beggs JD (2005) Lsm proteins and RNA processing. Biochem Soc Trans 33(Pt 3):433-8 SGD PMID 15916535
  2. He W and Parker R (2000) Functions of Lsm proteins in mRNA degradation and splicing. Curr Opin Cell Biol 12(3):346-50 SGD PMID 10801455
  3. Kufel J, et al. (2004) Nuclear pre-mRNA decapping and 5' degradation in yeast require the Lsm2-8p complex. Mol Cell Biol 24(21):9646-57 SGD PMID 15485930

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