YOR021C - Revision history

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@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YOR021C:''' SPOUT methyltransferase, catalyzes methylation of Rps3p on arg-146; not an essential gene; predicted to be involved in rRNA processing and ribosome biogenesis and in biopolymer catabolism<ref name='S000071347'>Giaever G, et al. (2002) Functional profiling of the Saccharomyces cerevisiae genome. Nature 418(6896):387-91 {{SGDpaper|S000071347}} PMID 12140549</ref><ref name='S000122027'>Nariai N, et al. (2007) Probabilistic protein function prediction from heterogeneous genome-wide data. PLoS One 2(3):e337 {{SGDpaper|S000122027}} PMID 17396164</ref><ref name='S000114995'>Wade CH, et al. (2006) The budding yeast rRNA and ribosome biosynthesis (RRB) regulon contains over 200 genes. Yeast 23(4):293-306 {{SGDpaper|S000114995}} PMID 16544271</ref><ref name='S000149740'>Young BD, et al. (2012) Identification of Methylated Proteins in the Yeast Small Ribosomal Subunit: A Role for SPOUT Methyltransferases in Protein Arginine Methylation. Biochemistry ()
+'''Description of YOR021C:''' SPOUT methyltransferase; catalyzes omega-monomethylation of Rps3p on Arg-146; not an essential gene; predicted to be involved in rRNA processing and ribosome biogenesis and in biopolymer catabolism<ref name='S000071347'>Giaever G, et al. (2002) Functional profiling of the Saccharomyces cerevisiae genome. Nature 418(6896):387-91 {{SGDpaper|S000071347}} PMID 12140549</ref><ref name='S000122027'>Nariai N, et al. (2007) Probabilistic protein function prediction from heterogeneous genome-wide data. PLoS One 2(3):e337 {{SGDpaper|S000122027}} PMID 17396164</ref><ref name='S000114995'>Wade CH, et al. (2006) The budding yeast rRNA and ribosome biosynthesis (RRB) regulon contains over 200 genes. Yeast 23(4):293-306 {{SGDpaper|S000114995}} PMID 16544271</ref><ref name='S000149740'>Young BD, et al. (2012) Identification of Methylated Proteins in the Yeast Small Ribosomal Subunit: A Role for SPOUT Methyltransferases in Protein Arginine Methylation. Biochemistry ()
   {{SGDpaper|S000149740}} PMID 22650761</ref>
 <br>

@@ Line 6: / Line 6: @@
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000005547 YOR021C]
 |-
-|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''         ||'' ''
+|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''         ||''SFM1 ''
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases'''           ||'' ''
 |-
-|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type'''           || ORF, Uncharacterized[[Category:ORF]][[Category:ORF, Uncharacterized]]
+|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type'''           || ORF, Verified[[Category:ORF]][[Category:ORF, Verified]]
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YOR021C:''' Putative protein of unknown function; YOR021C is not an essential gene; predicted to be involved in rRNA processing and ribosome biogenesis and in biopolymer catabolism<ref name='S000071347'>Giaever G, et al. (2002) Functional profiling of the Saccharomyces cerevisiae genome. Nature 418(6896):387-91 {{SGDpaper|S000071347}} PMID 12140549</ref><ref name='S000122027'>Nariai N, et al. (2007) Probabilistic protein function prediction from heterogeneous genome-wide data. PLoS One 2(3):e337 {{SGDpaper|S000122027}} PMID 17396164</ref><ref name='S000114995'>Wade CH, et al. (2006) The budding yeast rRNA and ribosome biosynthesis (RRB) regulon contains over 200 genes. Yeast 23(4):293-306
+'''Description of YOR021C:''' SPOUT methyltransferase, catalyzes methylation of Rps3p on arg-146; not an essential gene; predicted to be involved in rRNA processing and ribosome biogenesis and in biopolymer catabolism<ref name='S000071347'>Giaever G, et al. (2002) Functional profiling of the Saccharomyces cerevisiae genome. Nature 418(6896):387-91 {{SGDpaper|S000071347}} PMID 12140549</ref><ref name='S000122027'>Nariai N, et al. (2007) Probabilistic protein function prediction from heterogeneous genome-wide data. PLoS One 2(3):e337 {{SGDpaper|S000122027}} PMID 17396164</ref><ref name='S000114995'>Wade CH, et al. (2006) The budding yeast rRNA and ribosome biosynthesis (RRB) regulon contains over 200 genes. Yeast 23(4):293-306 {{SGDpaper|S000114995}} PMID 16544271</ref><ref name='S000149740'>Young BD, et al. (2012) Identification of Methylated Proteins in the Yeast Small Ribosomal Subunit: A Role for SPOUT Methyltransferases in Protein Arginine Methylation. Biochemistry ()
-  {{SGDpaper|S000114995}} PMID 16544271</ref>
+  {{SGDpaper|S000149740}} PMID 22650761</ref>
 <br>
 <br>

@@ Line 4: / Line 4: @@
 {|{{Prettytable}} align = 'right' width = '200px'
 |-
-|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000005547 YOR021C]
+|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000005547 YOR021C]
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''         ||'' ''

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YOR021C:''' Putative protein of unknown function; YOR021C is not an essential gene; predicted to be involved in rRNA processing and ribosome biogenesis and in biopolymer catabolism<ref name='S000114995'>Wade CH, et al. (2006) The budding yeast rRNA and ribosome biosynthesis (RRB) regulon contains over 200 genes. Yeast 23(4):293-306 {{SGDpaper|S000114995}} PMID 16544271</ref><ref name='S000071347'>Giaever G, et al. (2002) Functional profiling of the Saccharomyces cerevisiae genome. Nature 418(6896):387-91 {{SGDpaper|S000071347}} PMID 12140549</ref><ref name='S000122027'>Nariai N, et al. (2007) Probabilistic protein function prediction from heterogeneous genome-wide data. PLoS One 2(3):e337
+'''Description of YOR021C:''' Putative protein of unknown function; YOR021C is not an essential gene; predicted to be involved in rRNA processing and ribosome biogenesis and in biopolymer catabolism<ref name='S000071347'>Giaever G, et al. (2002) Functional profiling of the Saccharomyces cerevisiae genome. Nature 418(6896):387-91 {{SGDpaper|S000071347}} PMID 12140549</ref><ref name='S000122027'>Nariai N, et al. (2007) Probabilistic protein function prediction from heterogeneous genome-wide data. PLoS One 2(3):e337 {{SGDpaper|S000122027}} PMID 17396164</ref><ref name='S000114995'>Wade CH, et al. (2006) The budding yeast rRNA and ribosome biosynthesis (RRB) regulon contains over 200 genes. Yeast 23(4):293-306
-  {{SGDpaper|S000122027}} PMID 17396164</ref>
+  {{SGDpaper|S000114995}} PMID 16544271</ref>
 <br>
 <br>

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YOR021C:''' Putative protein of unknown function; YOR021C is not an essential gene; predicted to be involved in rRNA processing and ribosome biogenesis and in biopolymer catabolism<ref name='S000114995'>Wade CH, et al. (2006) The budding yeast rRNA and ribosome biosynthesis (RRB) regulon contains over 200 genes. Yeast 23(4):293-306 {{SGDpaper|S000114995}} PMID 16544271</ref><ref name='S000071347'>Giaever G, et al. (2002) Functional profiling of the Saccharomyces cerevisiae genome. Nature 418(6896):387-91 {{SGDpaper|S000071347}} PMID 12140549</ref><ref name='S000122027'>Nariai N, et al. (2007) Probabilistic protein function prediction from heterogeneous genome-wide data. PLoS ONE 2(3):e337
+'''Description of YOR021C:''' Putative protein of unknown function; YOR021C is not an essential gene; predicted to be involved in rRNA processing and ribosome biogenesis and in biopolymer catabolism<ref name='S000114995'>Wade CH, et al. (2006) The budding yeast rRNA and ribosome biosynthesis (RRB) regulon contains over 200 genes. Yeast 23(4):293-306 {{SGDpaper|S000114995}} PMID 16544271</ref><ref name='S000071347'>Giaever G, et al. (2002) Functional profiling of the Saccharomyces cerevisiae genome. Nature 418(6896):387-91 {{SGDpaper|S000071347}} PMID 12140549</ref><ref name='S000122027'>Nariai N, et al. (2007) Probabilistic protein function prediction from heterogeneous genome-wide data. PLoS One 2(3):e337
   {{SGDpaper|S000122027}} PMID 17396164</ref>
 <br>

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YOR021C:''' Putative protein of unknown function; YOR021C is not an essential gene<ref name='S000119159'>Fisk DG, et al. (2006) Saccharomyces cerevisiae S288C genome annotation: a working hypothesis. Yeast 23(12):857-65
+'''Description of YOR021C:''' Putative protein of unknown function; YOR021C is not an essential gene; predicted to be involved in rRNA processing and ribosome biogenesis and in biopolymer catabolism<ref name='S000122027'>Nariai N, et al. (2007) Probabilistic protein function prediction from heterogeneous genome-wide data. PLoS ONE 2(3):e337 {{SGDpaper|S000122027}} PMID 17396164</ref><ref name='S000114995'>Wade CH, et al. (2006) The budding yeast rRNA and ribosome biosynthesis (RRB) regulon contains over 200 genes. Yeast 23(4):293-306 {{SGDpaper|S000114995}} PMID 16544271</ref><ref name='S000071347'>Giaever G, et al. (2002) Functional profiling of the Saccharomyces cerevisiae genome. Nature 418(6896):387-91
-  {{SGDpaper|S000119159}} PMID 17001629</ref>
+  {{SGDpaper|S000071347}} PMID 12140549</ref>
 <br>
 <br>

@@ Line 4: / Line 4: @@
 {|{{Prettytable}} align = 'right' width = '200px'
 |-
-|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=YOR021C YOR021C]
+|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000005547 YOR021C]
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''         ||'' ''
@@ Line 14: / Line 14: @@
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 |nowrap| Chr XV:373439..372798
 |}
 <br>
-'''Description of {{PAGENAME}}:''' Hypothetical protein
+'''Description of YOR021C:''' Hypothetical protein
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@@ Line 36: / Line 38: @@
 J Biol Chem 278(5):3265-74</ref>
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← Older revision		Revision as of 20:02, 21 February 2007
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		+	<!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation -->
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		+	Specifically higher expression in carbon limited chemostat cultures versus carbon excess.
		+	<ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur.
		+	J Biol Chem 278(5):3265-74</ref>
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