YMR080C - Revision history

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 {|{{Prettytable}} align = 'right' width = '200px'
 |-
-|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000004685 YMR080C]
+|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000004685 YMR080C]
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 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''         ||''NAM7 ''

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 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
-|nowrap| Chr XIII:429626..426711
+|nowrap| Chr XIII:429627..426712
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 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''           || S000004685

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 |}
 <br>
-'''Description of YMR080C:''' ATP-dependent RNA helicase of the SFI superfamily involved in nonsense mediated mRNA decay; required for efficient translation termination at nonsense codons and targeting of NMD substrates to P-bodies; involved in telomere maintenance<ref name='S000061923'>de la Cruz J, et al. (1999) Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and related families. Trends Biochem Sci 24(5):192-8 {{SGDpaper|S000061923}} PMID 10322435</ref><ref name='S000114270'>Askree SH, et al. (2004) A genome-wide screen for Saccharomyces cerevisiae deletion mutants that affect telomere length. Proc Natl Acad Sci U S A 101(23):8658-63 {{SGDpaper|S000114270}} PMID 15161972</ref><ref name='S000116680'>Sheth U and Parker R (2006) Targeting of aberrant mRNAs to cytoplasmic processing bodies. Cell 125(6):1095-109 {{SGDpaper|S000116680}} PMID 16777600</ref><ref name='S000127349'>Takahashi S, et al. (2008) Upf1 potentially serves as a RING-related E3 ubiquitin ligase via its association with Upf3 in yeast. RNA 14(9):1950-8
+'''Description of YMR080C:''' ATP-dependent RNA helicase of the SFI superfamily involved in nonsense mediated mRNA decay; required for efficient translation termination at nonsense codons and targeting of NMD substrates to P-bodies; involved in telomere maintenance<ref name='S000114270'>Askree SH, et al. (2004) A genome-wide screen for Saccharomyces cerevisiae deletion mutants that affect telomere length. Proc Natl Acad Sci U S A 101(23):8658-63 {{SGDpaper|S000114270}} PMID 15161972</ref><ref name='S000116680'>Sheth U and Parker R (2006) Targeting of aberrant mRNAs to cytoplasmic processing bodies. Cell 125(6):1095-109 {{SGDpaper|S000116680}} PMID 16777600</ref><ref name='S000127349'>Takahashi S, et al. (2008) Upf1 potentially serves as a RING-related E3 ubiquitin ligase via its association with Upf3 in yeast. RNA 14(9):1950-8 {{SGDpaper|S000127349}} PMID 18676617</ref><ref name='S000061923'>de la Cruz J, et al. (1999) Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and related families. Trends Biochem Sci 24(5):192-8
-  {{SGDpaper|S000127349}} PMID 18676617</ref>
+  {{SGDpaper|S000061923}} PMID 10322435</ref>
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 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''         ||''NAM7 ''
 |-
-|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases'''           ||''IFS2, MOF4, UPF1''
+|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases'''           ||''IFS2, MOF4, SUP113, UPF1''
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 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type'''           || ORF, Verified[[Category:ORF]][[Category:ORF, Verified]]

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 |}
 <br>
-'''Description of YMR080C:''' ATP-dependent RNA helicase of the SFI superfamily, required for nonsense mediated mRNA decay and for efficient translation termination at nonsense codons; involved in telomere maintenance; potentially has E3 ubiquitin ligase activity<ref name='S000061923'>de la Cruz J, et al. (1999) Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and related families. Trends Biochem Sci 24(5):192-8 {{SGDpaper|S000061923}} PMID 10322435</ref><ref name='S000114270'>Askree SH, et al. (2004) A genome-wide screen for Saccharomyces cerevisiae deletion mutants that affect telomere length. Proc Natl Acad Sci U S A 101(23):8658-63 {{SGDpaper|S000114270}} PMID 15161972</ref><ref name='S000127349'>Takahashi S, et al. (2008) Upf1 potentially serves as a RING-related E3 ubiquitin ligase via its association with Upf3 in yeast. RNA 14(9):1950-8
+'''Description of YMR080C:''' ATP-dependent RNA helicase of the SFI superfamily involved in nonsense mediated mRNA decay; required for efficient translation termination at nonsense codons and targeting of NMD substrates to P-bodies; involved in telomere maintenance<ref name='S000061923'>de la Cruz J, et al. (1999) Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and related families. Trends Biochem Sci 24(5):192-8 {{SGDpaper|S000061923}} PMID 10322435</ref><ref name='S000114270'>Askree SH, et al. (2004) A genome-wide screen for Saccharomyces cerevisiae deletion mutants that affect telomere length. Proc Natl Acad Sci U S A 101(23):8658-63 {{SGDpaper|S000114270}} PMID 15161972</ref><ref name='S000116680'>Sheth U and Parker R (2006) Targeting of aberrant mRNAs to cytoplasmic processing bodies. Cell 125(6):1095-109 {{SGDpaper|S000116680}} PMID 16777600</ref><ref name='S000127349'>Takahashi S, et al. (2008) Upf1 potentially serves as a RING-related E3 ubiquitin ligase via its association with Upf3 in yeast. RNA 14(9):1950-8
   {{SGDpaper|S000127349}} PMID 18676617</ref>
 <br>

← Older revision		Revision as of 20:02, 21 February 2007
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		+	<!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation -->
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		+	Specifically higher expression in carbon limited chemostat cultures versus carbon excess.
		+	<ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur.
		+	J Biol Chem 278(5):3265-74</ref>
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	<protect>		<protect>

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