YKL032C - Revision history

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{{PageTop}}
{|{{Prettytable}} align = 'right' width = '200px'
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=YKL032C YKL032C]
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''IXR1 ''
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases''' ||''ORD1''
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type''' || ORF, Verified[[Category:ORF]][[Category:ORF, Verified]]
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
|nowrap| Chr XI:381501..379708
|-
|colspan = '3'|{{Don'tEditThisBox}}
|}
 
'''Description of {{PAGENAME}}:''' Protein that binds DNA containing intrastrand cross-links formed by cisplatin, contains two HMG (high mobility group box) domains, which confer the ability to bend cisplatin-modified DNA; mediates aerobic transcriptional repression of COX5b<ref name='S000057564'>Chow CS, et al. (1994) HMG domain proteins induce sharp bends in cisplatin-modified DNA. Biochemistry 33(50):15124-30 {{SGDpaper|S000057564}} PMID 7999772</ref><ref name='S000045767'>Lambert JR, et al. (1994) The ORD1 gene encodes a transcription factor involved in oxygen regulation and is identical to IXR1, a gene that confers cisplatin sensitivity to Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 91(15):7345-9 {{SGDpaper|S000045767}} PMID 8041793</ref><ref name='S000042593'>Brown SJ, et al. (1993) Ixr1, a yeast protein that binds to platinated DNA and confers sensitivity to cisplatin. Science 261(5121):603-5
{{SGDpaper|S000042593}} PMID 8342024</ref>
 
 
 
 

__TOC__
==Community Commentary==
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==References==

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@@ Line 13: / Line 13: @@
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
-|nowrap| Chr XI:381501..379708
+|nowrap| Chr XI:381858..380065
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''           || S000001515

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YKL032C:''' Protein that binds DNA containing intrastrand cross-links formed by cisplatin, contains two HMG (high mobility group box) domains, which confer the ability to bend cisplatin-modified DNA; mediates aerobic transcriptional repression of COX5b<ref name='S000042593'>Brown SJ, et al. (1993) Ixr1, a yeast protein that binds to platinated DNA and confers sensitivity to cisplatin. Science 261(5121):603-5 {{SGDpaper|S000042593}} PMID 8342024</ref><ref name='S000045767'>Lambert JR, et al. (1994) The ORD1 gene encodes a transcription factor involved in oxygen regulation and is identical to IXR1, a gene that confers cisplatin sensitivity to Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 91(15):7345-9 {{SGDpaper|S000045767}} PMID 8041793</ref><ref name='S000057564'>Chow CS, et al. (1994) HMG domain proteins induce sharp bends in cisplatin-modified DNA. Biochemistry 33(50):15124-30
+'''Description of YKL032C:''' Protein that binds DNA containing intrastrand cross-links formed by cisplatin, contains two HMG (high mobility group box) domains, which confer the ability to bend cisplatin-modified DNA; mediates aerobic transcriptional repression of COX5b<ref name='S000042593'>Brown SJ, et al. (1993) Ixr1, a yeast protein that binds to platinated DNA and confers sensitivity to cisplatin. Science 261(5121):603-5 {{SGDpaper|S000042593}} PMID 8342024</ref><ref name='S000057564'>Chow CS, et al. (1994) HMG domain proteins induce sharp bends in cisplatin-modified DNA. Biochemistry 33(50):15124-30 {{SGDpaper|S000057564}} PMID 7999772</ref><ref name='S000045767'>Lambert JR, et al. (1994) The ORD1 gene encodes a transcription factor involved in oxygen regulation and is identical to IXR1, a gene that confers cisplatin sensitivity to Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 91(15):7345-9
- {{SGDpaper|S000057564}} PMID 7999772</ref>
+ {{SGDpaper|S000045767}} PMID 8041793</ref>
 <br>
 <br>

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YKL032C:''' Protein that binds DNA containing intrastrand cross-links formed by cisplatin, contains two HMG (high mobility group box) domains, which confer the ability to bend cisplatin-modified DNA; mediates aerobic transcriptional repression of COX5b<ref name='S000057564'>Chow CS, et al. (1994) HMG domain proteins induce sharp bends in cisplatin-modified DNA. Biochemistry 33(50):15124-30 {{SGDpaper|S000057564}} PMID 7999772</ref><ref name='S000045767'>Lambert JR, et al. (1994) The ORD1 gene encodes a transcription factor involved in oxygen regulation and is identical to IXR1, a gene that confers cisplatin sensitivity to Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 91(15):7345-9 {{SGDpaper|S000045767}} PMID 8041793</ref><ref name='S000042593'>Brown SJ, et al. (1993) Ixr1, a yeast protein that binds to platinated DNA and confers sensitivity to cisplatin. Science 261(5121):603-5
+'''Description of YKL032C:''' Protein that binds DNA containing intrastrand cross-links formed by cisplatin, contains two HMG (high mobility group box) domains, which confer the ability to bend cisplatin-modified DNA; mediates aerobic transcriptional repression of COX5b<ref name='S000042593'>Brown SJ, et al. (1993) Ixr1, a yeast protein that binds to platinated DNA and confers sensitivity to cisplatin. Science 261(5121):603-5 {{SGDpaper|S000042593}} PMID 8342024</ref><ref name='S000045767'>Lambert JR, et al. (1994) The ORD1 gene encodes a transcription factor involved in oxygen regulation and is identical to IXR1, a gene that confers cisplatin sensitivity to Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 91(15):7345-9 {{SGDpaper|S000045767}} PMID 8041793</ref><ref name='S000057564'>Chow CS, et al. (1994) HMG domain proteins induce sharp bends in cisplatin-modified DNA. Biochemistry 33(50):15124-30
-  {{SGDpaper|S000042593}} PMID 8342024</ref>
+  {{SGDpaper|S000057564}} PMID 7999772</ref>
 <br>
 <br>

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YKL032C:''' Protein that binds DNA containing intrastrand cross-links formed by cisplatin, contains two HMG (high mobility group box) domains, which confer the ability to bend cisplatin-modified DNA; mediates aerobic transcriptional repression of COX5b<ref name='S000042593'>Brown SJ, et al. (1993) Ixr1, a yeast protein that binds to platinated DNA and confers sensitivity to cisplatin. Science 261(5121):603-5 {{SGDpaper|S000042593}} PMID 8342024</ref><ref name='S000045767'>Lambert JR, et al. (1994) The ORD1 gene encodes a transcription factor involved in oxygen regulation and is identical to IXR1, a gene that confers cisplatin sensitivity to Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 91(15):7345-9 {{SGDpaper|S000045767}} PMID 8041793</ref><ref name='S000057564'>Chow CS, et al. (1994) HMG domain proteins induce sharp bends in cisplatin-modified DNA. Biochemistry 33(50):15124-30
+'''Description of YKL032C:''' Protein that binds DNA containing intrastrand cross-links formed by cisplatin, contains two HMG (high mobility group box) domains, which confer the ability to bend cisplatin-modified DNA; mediates aerobic transcriptional repression of COX5b<ref name='S000057564'>Chow CS, et al. (1994) HMG domain proteins induce sharp bends in cisplatin-modified DNA. Biochemistry 33(50):15124-30 {{SGDpaper|S000057564}} PMID 7999772</ref><ref name='S000045767'>Lambert JR, et al. (1994) The ORD1 gene encodes a transcription factor involved in oxygen regulation and is identical to IXR1, a gene that confers cisplatin sensitivity to Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 91(15):7345-9 {{SGDpaper|S000045767}} PMID 8041793</ref><ref name='S000042593'>Brown SJ, et al. (1993) Ixr1, a yeast protein that binds to platinated DNA and confers sensitivity to cisplatin. Science 261(5121):603-5
-  {{SGDpaper|S000057564}} PMID 7999772</ref>
+  {{SGDpaper|S000042593}} PMID 8342024</ref>
 <br>
 <br>

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YKL032C:''' Protein that binds DNA containing intrastrand cross-links formed by cisplatin, contains two HMG (high mobility group box) domains, which confer the ability to bend cisplatin-modified DNA; mediates aerobic transcriptional repression of COX5b<ref name='S000057564'>Chow CS, et al. (1994) HMG domain proteins induce sharp bends in cisplatin-modified DNA. Biochemistry 33(50):15124-30 {{SGDpaper|S000057564}} PMID 7999772</ref><ref name='S000045767'>Lambert JR, et al. (1994) The ORD1 gene encodes a transcription factor involved in oxygen regulation and is identical to IXR1, a gene that confers cisplatin sensitivity to Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 91(15):7345-9 {{SGDpaper|S000045767}} PMID 8041793</ref><ref name='S000042593'>Brown SJ, et al. (1993) Ixr1, a yeast protein that binds to platinated DNA and confers sensitivity to cisplatin. Science 261(5121):603-5
+'''Description of YKL032C:''' Protein that binds DNA containing intrastrand cross-links formed by cisplatin, contains two HMG (high mobility group box) domains, which confer the ability to bend cisplatin-modified DNA; mediates aerobic transcriptional repression of COX5b<ref name='S000042593'>Brown SJ, et al. (1993) Ixr1, a yeast protein that binds to platinated DNA and confers sensitivity to cisplatin. Science 261(5121):603-5 {{SGDpaper|S000042593}} PMID 8342024</ref><ref name='S000045767'>Lambert JR, et al. (1994) The ORD1 gene encodes a transcription factor involved in oxygen regulation and is identical to IXR1, a gene that confers cisplatin sensitivity to Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 91(15):7345-9 {{SGDpaper|S000045767}} PMID 8041793</ref><ref name='S000057564'>Chow CS, et al. (1994) HMG domain proteins induce sharp bends in cisplatin-modified DNA. Biochemistry 33(50):15124-30
-  {{SGDpaper|S000042593}} PMID 8342024</ref>
+  {{SGDpaper|S000057564}} PMID 7999772</ref>
 <br>
 <br>

@@ Line 4: / Line 4: @@
 {|{{Prettytable}} align = 'right' width = '200px'
 |-
-|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000001515 YKL032C]
+|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000001515 YKL032C]
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''         ||''IXR1 ''

← Older revision		Revision as of 20:02, 21 February 2007
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		+
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		+	<!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation -->
		+	<!--
		+	Specifically higher expression in carbon limited chemostat cultures versus carbon excess.
		+	<ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur.
		+	J Biol Chem 278(5):3265-74</ref>
		+	-->

	<protect>		<protect>

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 {|{{Prettytable}} align = 'right' width = '200px'
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 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 |nowrap| Chr XI:381501..379708
 |}
 <br>
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 __TOC__
 ==Community Commentary==
 {{CommentaryHelp}}
 ==References==
 <!-- REFERENCES ARE AUTOMATICALLY GENERATED.  PLEASE DON'T EDIT THIS SECTION-->
 {{RefHelp}}