YJR078W - Revision history

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{{PageTop}}
{|{{Prettytable}} align = 'right' width = '200px'
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=YJR078W YJR078W]
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''BNA2 ''
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases''' ||'' ''
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type''' || ORF, Verified[[Category:ORF]][[Category:ORF, Verified]]
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
|nowrap| Chr X:578853..580214
|-
|colspan = '3'|{{Don'tEditThisBox}}
|}
 
'''Description of {{PAGENAME}}:''' Tryptophan 2,3-dioxygenase, required for biosynthesis of nicotinic acid from tryptophan via kynurenine pathway<ref name='S000069977'>Panozzo C, et al. (2002) Aerobic and anaerobic NAD+ metabolism in Saccharomyces cerevisiae. FEBS Lett 517(1-3):97-102
{{SGDpaper|S000069977}} PMID 12062417</ref>
 
 
 
 

__TOC__
==Community Commentary==
{{CommentaryHelp}}

==References==

{{RefHelp}}

@@ Line 13: / Line 13: @@
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
-|nowrap| Chr X:578852..580213
+|nowrap| Chr X:578860..580221
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''           || S000003839

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YJR078W:''' Putative tryptophan 2,3-dioxygenase or indoleamine 2,3-dioxygenase, required for the de novo biosynthesis of NAD from tryptophan via kynurenine; expresssion is upregulated upon telomere uncapping; regulated by Hst1p and Aft2p<ref name='S000074280'>Bedalov A, et al. (2003) NAD+-dependent deacetylase Hst1p controls biosynthesis and cellular NAD+ levels in Saccharomyces cerevisiae. Mol Cell Biol 23(19):7044-54 {{SGDpaper|S000074280}} PMID 12972620</ref><ref name='S000127932'>Greenall A, et al. (2008) A genome wide analysis of the response to uncapped telomeres in budding yeast reveals a novel role for the NAD+ biosynthetic gene BNA2 in chromosome end protection. Genome Biol 9(10):R146 {{SGDpaper|S000127932}} PMID 18828915</ref><ref name='S000069977'>Panozzo C, et al. (2002) Aerobic and anaerobic NAD+ metabolism in Saccharomyces cerevisiae. FEBS Lett 517(1-3):97-102 {{SGDpaper|S000069977}} PMID 12062417</ref><ref name='S000073710'>Rutherford JC, et al. (2003) Aft1p and Aft2p mediate iron-responsive gene expression in yeast through related promoter elements. J Biol Chem 278(30):27636-43 {{SGDpaper|S000073710}} PMID 12756250</ref><ref name='S000125783'>Yuasa HJ, et al. (2007) Evolution of vertebrate indoleamine 2,3-dioxygenases. J Mol Evol 65(6):705-14
+'''Description of YJR078W:''' Putative tryptophan 2,3-dioxygenase or indoleamine 2,3-dioxygenase, required for de novo biosynthesis of NAD from tryptophan via kynurenine; interacts genetically with telomere capping gene CDC13; regulated by Hst1p and Aftp<ref name='S000074280'>Bedalov A, et al. (2003) NAD+-dependent deacetylase Hst1p controls biosynthesis and cellular NAD+ levels in Saccharomyces cerevisiae. Mol Cell Biol 23(19):7044-54 {{SGDpaper|S000074280}} PMID 12972620</ref><ref name='S000127932'>Greenall A, et al. (2008) A genome wide analysis of the response to uncapped telomeres in budding yeast reveals a novel role for the NAD+ biosynthetic gene BNA2 in chromosome end protection. Genome Biol 9(10):R146 {{SGDpaper|S000127932}} PMID 18828915</ref><ref name='S000069977'>Panozzo C, et al. (2002) Aerobic and anaerobic NAD+ metabolism in Saccharomyces cerevisiae. FEBS Lett 517(1-3):97-102 {{SGDpaper|S000069977}} PMID 12062417</ref><ref name='S000073710'>Rutherford JC, et al. (2003) Aft1p and Aft2p mediate iron-responsive gene expression in yeast through related promoter elements. J Biol Chem 278(30):27636-43 {{SGDpaper|S000073710}} PMID 12756250</ref><ref name='S000125783'>Yuasa HJ, et al. (2007) Evolution of vertebrate indoleamine 2,3-dioxygenases. J Mol Evol 65(6):705-14
   {{SGDpaper|S000125783}} PMID 18026683</ref>
 <br>

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YJR078W:''' Putative tryptophan 2,3-dioxygenase or indoleamine 2,3-dioxygenase, required for the de novo biosynthesis of NAD from tryptophan via kynurenine; expresssion is upregulated upon telomere uncapping; regulated by Hst1p and Aft2p<ref name='S000069977'>Panozzo C, et al. (2002) Aerobic and anaerobic NAD+ metabolism in Saccharomyces cerevisiae. FEBS Lett 517(1-3):97-102 {{SGDpaper|S000069977}} PMID 12062417</ref><ref name='S000073710'>Rutherford JC, et al. (2003) Aft1p and Aft2p mediate iron-responsive gene expression in yeast through related promoter elements. J Biol Chem 278(30):27636-43 {{SGDpaper|S000073710}} PMID 12756250</ref><ref name='S000074280'>Bedalov A, et al. (2003) NAD+-dependent deacetylase Hst1p controls biosynthesis and cellular NAD+ levels in Saccharomyces cerevisiae. Mol Cell Biol 23(19):7044-54 {{SGDpaper|S000074280}} PMID 12972620</ref><ref name='S000125783'>Yuasa HJ, et al. (2007) Evolution of vertebrate indoleamine 2,3-dioxygenases. J Mol Evol 65(6):705-14 {{SGDpaper|S000125783}} PMID 18026683</ref><ref name='S000127932'>Greenall A, et al. (2008) A genome wide analysis of the response to uncapped telomeres in budding yeast reveals a novel role for the NAD+ biosynthetic gene BNA2 in chromosome end protection. Genome Biol 9(10):R146
+'''Description of YJR078W:''' Putative tryptophan 2,3-dioxygenase or indoleamine 2,3-dioxygenase, required for the de novo biosynthesis of NAD from tryptophan via kynurenine; expresssion is upregulated upon telomere uncapping; regulated by Hst1p and Aft2p<ref name='S000074280'>Bedalov A, et al. (2003) NAD+-dependent deacetylase Hst1p controls biosynthesis and cellular NAD+ levels in Saccharomyces cerevisiae. Mol Cell Biol 23(19):7044-54 {{SGDpaper|S000074280}} PMID 12972620</ref><ref name='S000127932'>Greenall A, et al. (2008) A genome wide analysis of the response to uncapped telomeres in budding yeast reveals a novel role for the NAD+ biosynthetic gene BNA2 in chromosome end protection. Genome Biol 9(10):R146 {{SGDpaper|S000127932}} PMID 18828915</ref><ref name='S000069977'>Panozzo C, et al. (2002) Aerobic and anaerobic NAD+ metabolism in Saccharomyces cerevisiae. FEBS Lett 517(1-3):97-102 {{SGDpaper|S000069977}} PMID 12062417</ref><ref name='S000073710'>Rutherford JC, et al. (2003) Aft1p and Aft2p mediate iron-responsive gene expression in yeast through related promoter elements. J Biol Chem 278(30):27636-43 {{SGDpaper|S000073710}} PMID 12756250</ref><ref name='S000125783'>Yuasa HJ, et al. (2007) Evolution of vertebrate indoleamine 2,3-dioxygenases. J Mol Evol 65(6):705-14
-  {{SGDpaper|S000127932}} PMID 18828915</ref>
+  {{SGDpaper|S000125783}} PMID 18026683</ref>
 <br>
 <br>

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YJR078W:''' Putative tryptophan 2,3-dioxygenase or indoleamine 2,3-dioxygenase, required for the de novo biosynthesis of NAD from tryptophan via kynurenine; expresssion is upregulated upon telomere uncapping; regulated by Hst1p and Aft2p<ref name='S000127932'>Greenall A, et al. (2008) A genome wide analysis of the response to uncapped telomeres in budding yeast reveals a novel role for the NAD+ biosynthetic gene BNA2 in chromosome end protection. Genome Biol 9(10):R146 {{SGDpaper|S000127932}} PMID 18828915</ref><ref name='S000125783'>Yuasa HJ, et al. (2007) Evolution of vertebrate indoleamine 2,3-dioxygenases. J Mol Evol 65(6):705-14 {{SGDpaper|S000125783}} PMID 18026683</ref><ref name='S000074280'>Bedalov A, et al. (2003) NAD+-dependent deacetylase Hst1p controls biosynthesis and cellular NAD+ levels in Saccharomyces cerevisiae. Mol Cell Biol 23(19):7044-54 {{SGDpaper|S000074280}} PMID 12972620</ref><ref name='S000073710'>Rutherford JC, et al. (2003) Aft1p and Aft2p mediate iron-responsive gene expression in yeast through related promoter elements. J Biol Chem 278(30):27636-43 {{SGDpaper|S000073710}} PMID 12756250</ref><ref name='S000069977'>Panozzo C, et al. (2002) Aerobic and anaerobic NAD+ metabolism in Saccharomyces cerevisiae. FEBS Lett 517(1-3):97-102
+'''Description of YJR078W:''' Putative tryptophan 2,3-dioxygenase or indoleamine 2,3-dioxygenase, required for the de novo biosynthesis of NAD from tryptophan via kynurenine; expresssion is upregulated upon telomere uncapping; regulated by Hst1p and Aft2p<ref name='S000069977'>Panozzo C, et al. (2002) Aerobic and anaerobic NAD+ metabolism in Saccharomyces cerevisiae. FEBS Lett 517(1-3):97-102 {{SGDpaper|S000069977}} PMID 12062417</ref><ref name='S000073710'>Rutherford JC, et al. (2003) Aft1p and Aft2p mediate iron-responsive gene expression in yeast through related promoter elements. J Biol Chem 278(30):27636-43 {{SGDpaper|S000073710}} PMID 12756250</ref><ref name='S000074280'>Bedalov A, et al. (2003) NAD+-dependent deacetylase Hst1p controls biosynthesis and cellular NAD+ levels in Saccharomyces cerevisiae. Mol Cell Biol 23(19):7044-54 {{SGDpaper|S000074280}} PMID 12972620</ref><ref name='S000125783'>Yuasa HJ, et al. (2007) Evolution of vertebrate indoleamine 2,3-dioxygenases. J Mol Evol 65(6):705-14 {{SGDpaper|S000125783}} PMID 18026683</ref><ref name='S000127932'>Greenall A, et al. (2008) A genome wide analysis of the response to uncapped telomeres in budding yeast reveals a novel role for the NAD+ biosynthetic gene BNA2 in chromosome end protection. Genome Biol 9(10):R146
-  {{SGDpaper|S000069977}} PMID 12062417</ref>
+  {{SGDpaper|S000127932}} PMID 18828915</ref>
 <br>
 <br>

@@ Line 13: / Line 13: @@
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
-|nowrap| Chr X:578853..580214
+|nowrap| Chr X:578852..580213
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''           || S000003839
 |}
 <br>
-'''Description of YJR078W:''' Tryptophan 2,3-dioxygenase, required for biosynthesis of nicotinic acid from tryptophan via kynurenine pathway<ref name='S000069977'>Panozzo C, et al. (2002) Aerobic and anaerobic NAD+ metabolism in Saccharomyces cerevisiae. FEBS Lett 517(1-3):97-102
+'''Description of YJR078W:''' Putative tryptophan 2,3-dioxygenase or indoleamine 2,3-dioxygenase, required for the de novo biosynthesis of NAD from tryptophan via kynurenine; expresssion is upregulated upon telomere uncapping; regulated by Hst1p and Aft2p<ref name='S000127932'>Greenall A, et al. (2008) A genome wide analysis of the response to uncapped telomeres in budding yeast reveals a novel role for the NAD+ biosynthetic gene BNA2 in chromosome end protection. Genome Biol 9(10):R146 {{SGDpaper|S000127932}} PMID 18828915</ref><ref name='S000125783'>Yuasa HJ, et al. (2007) Evolution of vertebrate indoleamine 2,3-dioxygenases. J Mol Evol 65(6):705-14 {{SGDpaper|S000125783}} PMID 18026683</ref><ref name='S000074280'>Bedalov A, et al. (2003) NAD+-dependent deacetylase Hst1p controls biosynthesis and cellular NAD+ levels in Saccharomyces cerevisiae. Mol Cell Biol 23(19):7044-54 {{SGDpaper|S000074280}} PMID 12972620</ref><ref name='S000073710'>Rutherford JC, et al. (2003) Aft1p and Aft2p mediate iron-responsive gene expression in yeast through related promoter elements. J Biol Chem 278(30):27636-43 {{SGDpaper|S000073710}} PMID 12756250</ref><ref name='S000069977'>Panozzo C, et al. (2002) Aerobic and anaerobic NAD+ metabolism in Saccharomyces cerevisiae. FEBS Lett 517(1-3):97-102
   {{SGDpaper|S000069977}} PMID 12062417</ref>
 <br>

@@ Line 4: / Line 4: @@
 {|{{Prettytable}} align = 'right' width = '200px'
 |-
-|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000003839 YJR078W]
+|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000003839 YJR078W]
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''         ||''BNA2 ''

← Older revision		Revision as of 20:02, 21 February 2007
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		+	<!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation -->
		+	<!--
		+	Specifically higher expression in carbon limited chemostat cultures versus carbon excess.
		+	<ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur.
		+	J Biol Chem 278(5):3265-74</ref>
		+	-->

	<protect>		<protect>

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 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 |nowrap| Chr X:578853..580214
 |}
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 __TOC__
 ==Community Commentary==
 {{CommentaryHelp}}
 ==References==
 <!-- REFERENCES ARE AUTOMATICALLY GENERATED.  PLEASE DON'T EDIT THIS SECTION-->
 {{RefHelp}}