YJR066W - Revision history

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@@ Line 4: / Line 4: @@
 {|{{Prettytable}} align = 'right' width = '200px'
 |-
-|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000003827 YJR066W]
+|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000003827 YJR066W]
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''         ||''TOR1 ''

@@ Line 13: / Line 13: @@
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
-|nowrap| Chr X:559408..566820
+|nowrap| Chr X:559416..566828
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''           || S000003827

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YJR066W:''' PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that controls growth in response to nutrients by regulating translation, transcription, ribosome biogenesis, nutrient transport and autophagy; involved in meiosis<ref name='S000050240'>Barbet NC, et al. (1996) TOR controls translation initiation and early G1 progression in yeast. Mol Biol Cell 7(1):25-42 {{SGDpaper|S000050240}} PMID 8741837</ref><ref name='S000046200'>Beck T and Hall MN (1999) The TOR signalling pathway controls nuclear localization of nutrient-regulated transcription factors. Nature 402(6762):689-92 {{SGDpaper|S000046200}} PMID 10604478</ref><ref name='S000055222'>Cardenas ME, et al. (1999) The TOR signaling cascade regulates gene expression in response to nutrients. Genes Dev 13(24):3271-9 {{SGDpaper|S000055222}} PMID 10617575</ref><ref name='S000042312'>Kamada Y, et al. (2000) Tor-mediated induction of autophagy via an Apg1 protein kinase complex. J Cell Biol 150(6):1507-13 {{SGDpaper|S000042312}} PMID 10995454</ref><ref name='S000071528'>Loewith R, et al. (2002) Two TOR complexes, only one of which is rapamycin sensitive, have distinct roles in cell growth control. Mol Cell 10(3):457-68 {{SGDpaper|S000071528}} PMID 12408816</ref><ref name='S000077468'>Lorberg A and Hall MN (2004) TOR: the first 10 years. Curr Top Microbiol Immunol 279:1-18 {{SGDpaper|S000077468}} PMID 14560948</ref><ref name='S000080060'>Martin DE, et al. (2004) TOR regulates ribosomal protein gene expression via PKA and the Forkhead transcription factor FHL1. Cell 119(7):969-79 {{SGDpaper|S000080060}} PMID 15620355</ref><ref name='S000053128'>Powers T and Walter P (1999) Regulation of ribosome biogenesis by the rapamycin-sensitive TOR-signaling pathway in Saccharomyces cerevisiae. Mol Biol Cell 10(4):987-1000 {{SGDpaper|S000053128}} PMID 10198052</ref><ref name='S000071617'>Torres J, et al. (2002) Regulation of the cell integrity pathway by rapamycin-sensitive TOR function in budding yeast. J Biol Chem 277(45):43495-504 {{SGDpaper|S000071617}} PMID 12171921</ref><ref name='S000041984'>Zheng XF and Schreiber SL (1997) Target of rapamycin proteins and their kinase activities are required for meiosis. Proc Natl Acad Sci U S A 94(7):3070-5
+'''Description of YJR066W:''' PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that controls growth in response to nutrients by regulating translation, transcription, ribosome biogenesis, nutrient transport and autophagy; involved in meiosis<ref name='S000050240'>Barbet NC, et al. (1996) TOR controls translation initiation and early G1 progression in yeast. Mol Biol Cell 7(1):25-42 {{SGDpaper|S000050240}} PMID 8741837</ref><ref name='S000046200'>Beck T and Hall MN (1999) The TOR signalling pathway controls nuclear localization of nutrient-regulated transcription factors. Nature 402(6762):689-92 {{SGDpaper|S000046200}} PMID 10604478</ref><ref name='S000055222'>Cardenas ME, et al. (1999) The TOR signaling cascade regulates gene expression in response to nutrients. Genes Dev 13(24):3271-9 {{SGDpaper|S000055222}} PMID 10617575</ref><ref name='S000042312'>Kamada Y, et al. (2000) Tor-mediated induction of autophagy via an Apg1 protein kinase complex. J Cell Biol 150(6):1507-13 {{SGDpaper|S000042312}} PMID 10995454</ref><ref name='S000071528'>Loewith R, et al. (2002) Two TOR complexes, only one of which is rapamycin sensitive, have distinct roles in cell growth control. Mol Cell 10(3):457-68 {{SGDpaper|S000071528}} PMID 12408816</ref><ref name='S000077468'>Lorberg A and Hall MN (2004) TOR: the first 10 years. Curr Top Microbiol Immunol 279():1-18 {{SGDpaper|S000077468}} PMID 14560948</ref><ref name='S000080060'>Martin DE, et al. (2004) TOR regulates ribosomal protein gene expression via PKA and the Forkhead transcription factor FHL1. Cell 119(7):969-79 {{SGDpaper|S000080060}} PMID 15620355</ref><ref name='S000053128'>Powers T and Walter P (1999) Regulation of ribosome biogenesis by the rapamycin-sensitive TOR-signaling pathway in Saccharomyces cerevisiae. Mol Biol Cell 10(4):987-1000 {{SGDpaper|S000053128}} PMID 10198052</ref><ref name='S000071617'>Torres J, et al. (2002) Regulation of the cell integrity pathway by rapamycin-sensitive TOR function in budding yeast. J Biol Chem 277(45):43495-504 {{SGDpaper|S000071617}} PMID 12171921</ref><ref name='S000041984'>Zheng XF and Schreiber SL (1997) Target of rapamycin proteins and their kinase activities are required for meiosis. Proc Natl Acad Sci U S A 94(7):3070-5
   {{SGDpaper|S000041984}} PMID 9096347</ref>
 <br>

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YJR066W:''' PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that controls growth in response to nutrients by regulating translation, transcription, ribosome biogenesis, nutrient transport and autophagy; involved in meiosis<ref name='S000041984'>Zheng XF and Schreiber SL (1997) Target of rapamycin proteins and their kinase activities are required for meiosis. Proc Natl Acad Sci U S A 94(7):3070-5 {{SGDpaper|S000041984}} PMID 9096347</ref><ref name='S000042312'>Kamada Y, et al. (2000) Tor-mediated induction of autophagy via an Apg1 protein kinase complex. J Cell Biol 150(6):1507-13 {{SGDpaper|S000042312}} PMID 10995454</ref><ref name='S000046200'>Beck T and Hall MN (1999) The TOR signalling pathway controls nuclear localization of nutrient-regulated transcription factors. Nature 402(6762):689-92 {{SGDpaper|S000046200}} PMID 10604478</ref><ref name='S000050240'>Barbet NC, et al. (1996) TOR controls translation initiation and early G1 progression in yeast. Mol Biol Cell 7(1):25-42 {{SGDpaper|S000050240}} PMID 8741837</ref><ref name='S000053128'>Powers T and Walter P (1999) Regulation of ribosome biogenesis by the rapamycin-sensitive TOR-signaling pathway in Saccharomyces cerevisiae. Mol Biol Cell 10(4):987-1000 {{SGDpaper|S000053128}} PMID 10198052</ref><ref name='S000055222'>Cardenas ME, et al. (1999) The TOR signaling cascade regulates gene expression in response to nutrients. Genes Dev 13(24):3271-9 {{SGDpaper|S000055222}} PMID 10617575</ref><ref name='S000080060'>Martin DE, et al. (2004) TOR regulates ribosomal protein gene expression via PKA and the Forkhead transcription factor FHL1. Cell 119(7):969-79 {{SGDpaper|S000080060}} PMID 15620355</ref><ref name='S000077468'>Lorberg A and Hall MN (2004) TOR: the first 10 years. Curr Top Microbiol Immunol 279:1-18 {{SGDpaper|S000077468}} PMID 14560948</ref><ref name='S000071528'>Loewith R, et al. (2002) Two TOR complexes, only one of which is rapamycin sensitive, have distinct roles in cell growth control. Mol Cell 10(3):457-68 {{SGDpaper|S000071528}} PMID 12408816</ref><ref name='S000071617'>Torres J, et al. (2002) Regulation of the cell integrity pathway by rapamycin-sensitive TOR function in budding yeast. J Biol Chem 277(45):43495-504
+'''Description of YJR066W:''' PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that controls growth in response to nutrients by regulating translation, transcription, ribosome biogenesis, nutrient transport and autophagy; involved in meiosis<ref name='S000050240'>Barbet NC, et al. (1996) TOR controls translation initiation and early G1 progression in yeast. Mol Biol Cell 7(1):25-42 {{SGDpaper|S000050240}} PMID 8741837</ref><ref name='S000046200'>Beck T and Hall MN (1999) The TOR signalling pathway controls nuclear localization of nutrient-regulated transcription factors. Nature 402(6762):689-92 {{SGDpaper|S000046200}} PMID 10604478</ref><ref name='S000055222'>Cardenas ME, et al. (1999) The TOR signaling cascade regulates gene expression in response to nutrients. Genes Dev 13(24):3271-9 {{SGDpaper|S000055222}} PMID 10617575</ref><ref name='S000042312'>Kamada Y, et al. (2000) Tor-mediated induction of autophagy via an Apg1 protein kinase complex. J Cell Biol 150(6):1507-13 {{SGDpaper|S000042312}} PMID 10995454</ref><ref name='S000071528'>Loewith R, et al. (2002) Two TOR complexes, only one of which is rapamycin sensitive, have distinct roles in cell growth control. Mol Cell 10(3):457-68 {{SGDpaper|S000071528}} PMID 12408816</ref><ref name='S000077468'>Lorberg A and Hall MN (2004) TOR: the first 10 years. Curr Top Microbiol Immunol 279:1-18 {{SGDpaper|S000077468}} PMID 14560948</ref><ref name='S000080060'>Martin DE, et al. (2004) TOR regulates ribosomal protein gene expression via PKA and the Forkhead transcription factor FHL1. Cell 119(7):969-79 {{SGDpaper|S000080060}} PMID 15620355</ref><ref name='S000053128'>Powers T and Walter P (1999) Regulation of ribosome biogenesis by the rapamycin-sensitive TOR-signaling pathway in Saccharomyces cerevisiae. Mol Biol Cell 10(4):987-1000 {{SGDpaper|S000053128}} PMID 10198052</ref><ref name='S000071617'>Torres J, et al. (2002) Regulation of the cell integrity pathway by rapamycin-sensitive TOR function in budding yeast. J Biol Chem 277(45):43495-504 {{SGDpaper|S000071617}} PMID 12171921</ref><ref name='S000041984'>Zheng XF and Schreiber SL (1997) Target of rapamycin proteins and their kinase activities are required for meiosis. Proc Natl Acad Sci U S A 94(7):3070-5
-  {{SGDpaper|S000071617}} PMID 12171921</ref>
+  {{SGDpaper|S000041984}} PMID 9096347</ref>
 <br>
 <br>

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YJR066W:''' PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that controls growth in response to nutrients by regulating translation, transcription, ribosome biogenesis, nutrient transport and autophagy; involved in meiosis<ref name='S000080060'>Martin DE, et al. (2004) TOR regulates ribosomal protein gene expression via PKA and the Forkhead transcription factor FHL1. Cell 119(7):969-79 {{SGDpaper|S000080060}} PMID 15620355</ref><ref name='S000077468'>Lorberg A and Hall MN (2004) TOR: the first 10 years. Curr Top Microbiol Immunol 279:1-18 {{SGDpaper|S000077468}} PMID 14560948</ref><ref name='S000071617'>Torres J, et al. (2002) Regulation of the cell integrity pathway by rapamycin-sensitive TOR function in budding yeast. J Biol Chem 277(45):43495-504 {{SGDpaper|S000071617}} PMID 12171921</ref><ref name='S000071528'>Loewith R, et al. (2002) Two TOR complexes, only one of which is rapamycin sensitive, have distinct roles in cell growth control. Mol Cell 10(3):457-68 {{SGDpaper|S000071528}} PMID 12408816</ref><ref name='S000055222'>Cardenas ME, et al. (1999) The TOR signaling cascade regulates gene expression in response to nutrients. Genes Dev 13(24):3271-9 {{SGDpaper|S000055222}} PMID 10617575</ref><ref name='S000053128'>Powers T and Walter P (1999) Regulation of ribosome biogenesis by the rapamycin-sensitive TOR-signaling pathway in Saccharomyces cerevisiae. Mol Biol Cell 10(4):987-1000 {{SGDpaper|S000053128}} PMID 10198052</ref><ref name='S000050240'>Barbet NC, et al. (1996) TOR controls translation initiation and early G1 progression in yeast. Mol Biol Cell 7(1):25-42 {{SGDpaper|S000050240}} PMID 8741837</ref><ref name='S000046200'>Beck T and Hall MN (1999) The TOR signalling pathway controls nuclear localization of nutrient-regulated transcription factors. Nature 402(6762):689-92 {{SGDpaper|S000046200}} PMID 10604478</ref><ref name='S000042312'>Kamada Y, et al. (2000) Tor-mediated induction of autophagy via an Apg1 protein kinase complex. J Cell Biol 150(6):1507-13 {{SGDpaper|S000042312}} PMID 10995454</ref><ref name='S000041984'>Zheng XF and Schreiber SL (1997) Target of rapamycin proteins and their kinase activities are required for meiosis. Proc Natl Acad Sci U S A 94(7):3070-5
+'''Description of YJR066W:''' PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that controls growth in response to nutrients by regulating translation, transcription, ribosome biogenesis, nutrient transport and autophagy; involved in meiosis<ref name='S000041984'>Zheng XF and Schreiber SL (1997) Target of rapamycin proteins and their kinase activities are required for meiosis. Proc Natl Acad Sci U S A 94(7):3070-5 {{SGDpaper|S000041984}} PMID 9096347</ref><ref name='S000042312'>Kamada Y, et al. (2000) Tor-mediated induction of autophagy via an Apg1 protein kinase complex. J Cell Biol 150(6):1507-13 {{SGDpaper|S000042312}} PMID 10995454</ref><ref name='S000046200'>Beck T and Hall MN (1999) The TOR signalling pathway controls nuclear localization of nutrient-regulated transcription factors. Nature 402(6762):689-92 {{SGDpaper|S000046200}} PMID 10604478</ref><ref name='S000050240'>Barbet NC, et al. (1996) TOR controls translation initiation and early G1 progression in yeast. Mol Biol Cell 7(1):25-42 {{SGDpaper|S000050240}} PMID 8741837</ref><ref name='S000053128'>Powers T and Walter P (1999) Regulation of ribosome biogenesis by the rapamycin-sensitive TOR-signaling pathway in Saccharomyces cerevisiae. Mol Biol Cell 10(4):987-1000 {{SGDpaper|S000053128}} PMID 10198052</ref><ref name='S000055222'>Cardenas ME, et al. (1999) The TOR signaling cascade regulates gene expression in response to nutrients. Genes Dev 13(24):3271-9 {{SGDpaper|S000055222}} PMID 10617575</ref><ref name='S000080060'>Martin DE, et al. (2004) TOR regulates ribosomal protein gene expression via PKA and the Forkhead transcription factor FHL1. Cell 119(7):969-79 {{SGDpaper|S000080060}} PMID 15620355</ref><ref name='S000077468'>Lorberg A and Hall MN (2004) TOR: the first 10 years. Curr Top Microbiol Immunol 279:1-18 {{SGDpaper|S000077468}} PMID 14560948</ref><ref name='S000071528'>Loewith R, et al. (2002) Two TOR complexes, only one of which is rapamycin sensitive, have distinct roles in cell growth control. Mol Cell 10(3):457-68 {{SGDpaper|S000071528}} PMID 12408816</ref><ref name='S000071617'>Torres J, et al. (2002) Regulation of the cell integrity pathway by rapamycin-sensitive TOR function in budding yeast. J Biol Chem 277(45):43495-504
-  {{SGDpaper|S000041984}} PMID 9096347</ref>
+  {{SGDpaper|S000071617}} PMID 12171921</ref>
 <br>
 <br>

@@ Line 4: / Line 4: @@
 {|{{Prettytable}} align = 'right' width = '200px'
 |-
-|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=YJR066W YJR066W]
+|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000003827 YJR066W]
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''         ||''TOR1 ''
@@ Line 14: / Line 14: @@
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 |nowrap| Chr X:559409..566821
 |}
 <br>
-'''Description of {{PAGENAME}}:''' PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that controls growth in response to nutrients by regulating translation, transcription, ribosome biogenesis, nutrient transport and autophagy; involved in meiosis<ref name='S000080060'>Martin DE, et al. (2004) TOR regulates ribosomal protein gene expression via PKA and the Forkhead transcription factor FHL1. Cell 119(7):969-79 {{SGDpaper|S000080060}} PMID 15620355</ref><ref name='S000077468'>Lorberg A and Hall MN (2004) TOR: the first 10 years. Curr Top Microbiol Immunol 279():1-18 {{SGDpaper|S000077468}} PMID 14560948</ref><ref name='S000071617'>Torres J, et al. (2002) Regulation of the cell integrity pathway by rapamycin-sensitive TOR function in budding yeast. J Biol Chem 277(45):43495-504 {{SGDpaper|S000071617}} PMID 12171921</ref><ref name='S000071528'>Loewith R, et al. (2002) Two TOR complexes, only one of which is rapamycin sensitive, have distinct roles in cell growth control. Mol Cell 10(3):457-68 {{SGDpaper|S000071528}} PMID 12408816</ref><ref name='S000055222'>Cardenas ME, et al. (1999) The TOR signaling cascade regulates gene expression in response to nutrients. Genes Dev 13(24):3271-9 {{SGDpaper|S000055222}} PMID 10617575</ref><ref name='S000053128'>Powers T and Walter P (1999) Regulation of ribosome biogenesis by the rapamycin-sensitive TOR-signaling pathway in Saccharomyces cerevisiae. Mol Biol Cell 10(4):987-1000 {{SGDpaper|S000053128}} PMID 10198052</ref><ref name='S000050240'>Barbet NC, et al. (1996) TOR controls translation initiation and early G1 progression in yeast. Mol Biol Cell 7(1):25-42 {{SGDpaper|S000050240}} PMID 8741837</ref><ref name='S000046200'>Beck T and Hall MN (1999) The TOR signalling pathway controls nuclear localization of nutrient-regulated transcription factors. Nature 402(6762):689-92 {{SGDpaper|S000046200}} PMID 10604478</ref><ref name='S000042312'>Kamada Y, et al. (2000) Tor-mediated induction of autophagy via an Apg1 protein kinase complex. J Cell Biol 150(6):1507-13 {{SGDpaper|S000042312}} PMID 10995454</ref><ref name='S000041984'>Zheng XF and Schreiber SL (1997) Target of rapamycin proteins and their kinase activities are required for meiosis. Proc Natl Acad Sci U S A 94(7):3070-5
+'''Description of YJR066W:''' PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that controls growth in response to nutrients by regulating translation, transcription, ribosome biogenesis, nutrient transport and autophagy; involved in meiosis<ref name='S000080060'>Martin DE, et al. (2004) TOR regulates ribosomal protein gene expression via PKA and the Forkhead transcription factor FHL1. Cell 119(7):969-79 {{SGDpaper|S000080060}} PMID 15620355</ref><ref name='S000077468'>Lorberg A and Hall MN (2004) TOR: the first 10 years. Curr Top Microbiol Immunol 279():1-18 {{SGDpaper|S000077468}} PMID 14560948</ref><ref name='S000071617'>Torres J, et al. (2002) Regulation of the cell integrity pathway by rapamycin-sensitive TOR function in budding yeast. J Biol Chem 277(45):43495-504 {{SGDpaper|S000071617}} PMID 12171921</ref><ref name='S000071528'>Loewith R, et al. (2002) Two TOR complexes, only one of which is rapamycin sensitive, have distinct roles in cell growth control. Mol Cell 10(3):457-68 {{SGDpaper|S000071528}} PMID 12408816</ref><ref name='S000055222'>Cardenas ME, et al. (1999) The TOR signaling cascade regulates gene expression in response to nutrients. Genes Dev 13(24):3271-9 {{SGDpaper|S000055222}} PMID 10617575</ref><ref name='S000053128'>Powers T and Walter P (1999) Regulation of ribosome biogenesis by the rapamycin-sensitive TOR-signaling pathway in Saccharomyces cerevisiae. Mol Biol Cell 10(4):987-1000 {{SGDpaper|S000053128}} PMID 10198052</ref><ref name='S000050240'>Barbet NC, et al. (1996) TOR controls translation initiation and early G1 progression in yeast. Mol Biol Cell 7(1):25-42 {{SGDpaper|S000050240}} PMID 8741837</ref><ref name='S000046200'>Beck T and Hall MN (1999) The TOR signalling pathway controls nuclear localization of nutrient-regulated transcription factors. Nature 402(6762):689-92 {{SGDpaper|S000046200}} PMID 10604478</ref><ref name='S000042312'>Kamada Y, et al. (2000) Tor-mediated induction of autophagy via an Apg1 protein kinase complex. J Cell Biol 150(6):1507-13 {{SGDpaper|S000042312}} PMID 10995454</ref><ref name='S000041984'>Zheng XF and Schreiber SL (1997) Target of rapamycin proteins and their kinase activities are required for meiosis. Proc Natl Acad Sci U S A 94(7):3070-5
   {{SGDpaper|S000041984}} PMID 9096347</ref>
 <br>
@@ Line 44: / Line 46: @@
 J Biol Chem 278(5):3265-74</ref>
 -->
 <protect>

← Older revision		Revision as of 20:02, 21 February 2007
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		+	<!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation -->
		+	<!--
		+	Specifically higher expression in carbon limited chemostat cultures versus carbon excess.
		+	<ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur.
		+	J Biol Chem 278(5):3265-74</ref>
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	<protect>		<protect>

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 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 |nowrap| Chr X:559409..566821
 |}
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 ==Community Commentary==
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