YJL140W - Revision history

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@@ Line 4: / Line 4: @@
 {|{{Prettytable}} align = 'right' width = '200px'
 |-
-|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000003676 YJL140W]
+|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000003676 YJL140W]
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''         ||''RPB4 ''

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YJL140W:''' RNA polymerase II subunit B32; forms two subunit dissociable complex with Rpb7p; involved in recruitment of 3'-end processing factors to transcribing RNA polymerase II complex and in export of mRNA to cytoplasm under stress conditions<ref name='S000057661'>Archambault J and Friesen JD (1993) Genetics of eukaryotic RNA polymerases I, II, and III. Microbiol Rev 57(3):703-24 {{SGDpaper|S000057661}} PMID 8246845</ref><ref name='S000080887'>Choder M (2004) Rpb4 and Rpb7: subunits of RNA polymerase II and beyond. Trends Biochem Sci 29(12):674-81 {{SGDpaper|S000080887}} PMID 15544954</ref><ref name='S000058793'>Cramer P, et al. (2000) Architecture of RNA polymerase II and implications for the transcription mechanism. Science 288(5466):640-9 {{SGDpaper|S000058793}} PMID 10784442</ref><ref name='S000058335'>Hampsey M (1998) Molecular genetics of the RNA polymerase II general transcriptional machinery. Microbiol Mol Biol Rev 62(2):465-503 {{SGDpaper|S000058335}} PMID 9618449</ref><ref name='S000125251'>Runner VM, et al. (2008) The Rpb4 subunit of RNA polymerase II contributes to cotranscriptional recruitment of 3' processing factors. Mol Cell Biol 28(6):1883-91 {{SGDpaper|S000125251}} PMID 18195044</ref><ref name='S000086303'>Sampath V and Sadhale P (2005) Rpb4 and Rpb7: a sub-complex integral to multi-subunit RNA polymerases performs a multitude of functions. IUBMB Life 57(2):93-102
+'''Description of YJL140W:''' RNA polymerase II subunit B32; forms two subunit dissociable complex with Rpb7p; involved in recruitment of 3'-end processing factors to transcribing RNA polymerase II complex and in export of mRNA to cytoplasm under stress conditions; also involved in translation initiation<ref name='S000057661'>Archambault J and Friesen JD (1993) Genetics of eukaryotic RNA polymerases I, II, and III. Microbiol Rev 57(3):703-24 {{SGDpaper|S000057661}} PMID 8246845</ref><ref name='S000080887'>Choder M (2004) Rpb4 and Rpb7: subunits of RNA polymerase II and beyond. Trends Biochem Sci 29(12):674-81 {{SGDpaper|S000080887}} PMID 15544954</ref><ref name='S000058793'>Cramer P, et al. (2000) Architecture of RNA polymerase II and implications for the transcription mechanism. Science 288(5466):640-9 {{SGDpaper|S000058793}} PMID 10784442</ref><ref name='S000058335'>Hampsey M (1998) Molecular genetics of the RNA polymerase II general transcriptional machinery. Microbiol Mol Biol Rev 62(2):465-503 {{SGDpaper|S000058335}} PMID 9618449</ref><ref name='S000140865'>Harel-Sharvit L, et al. (2010) RNA Polymerase II Subunits Link Transcription and mRNA Decay to Translation. Cell 143(4):552-63 {{SGDpaper|S000140865}} PMID 21074047</ref><ref name='S000125251'>Runner VM, et al. (2008) The Rpb4 subunit of RNA polymerase II contributes to cotranscriptional recruitment of 3' processing factors. Mol Cell Biol 28(6):1883-91 {{SGDpaper|S000125251}} PMID 18195044</ref><ref name='S000086303'>Sampath V and Sadhale P (2005) Rpb4 and Rpb7: a sub-complex integral to multi-subunit RNA polymerases performs a multitude of functions. IUBMB Life 57(2):93-102
   {{SGDpaper|S000086303}} PMID 16036568</ref>
 <br>

@@ Line 13: / Line 13: @@
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
-|nowrap| Chr X:150957..151622
+|nowrap| Chr X:150961..151626
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''           || S000003676

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YJL140W:''' RNA polymerase II subunit B32; forms two subunit dissociable complex with Rpb7p; involved recruitment of 3'-end processing factors to transcribing RNA polymerase II complex and in export of mRNA to cytoplasm under stress conditions<ref name='S000057661'>Archambault J and Friesen JD (1993) Genetics of eukaryotic RNA polymerases I, II, and III. Microbiol Rev 57(3):703-24 {{SGDpaper|S000057661}} PMID 8246845</ref><ref name='S000080887'>Choder M (2004) Rpb4 and Rpb7: subunits of RNA polymerase II and beyond. Trends Biochem Sci 29(12):674-81 {{SGDpaper|S000080887}} PMID 15544954</ref><ref name='S000058793'>Cramer P, et al. (2000) Architecture of RNA polymerase II and implications for the transcription mechanism. Science 288(5466):640-9 {{SGDpaper|S000058793}} PMID 10784442</ref><ref name='S000058335'>Hampsey M (1998) Molecular genetics of the RNA polymerase II general transcriptional machinery. Microbiol Mol Biol Rev 62(2):465-503 {{SGDpaper|S000058335}} PMID 9618449</ref><ref name='S000125251'>Runner VM, et al. (2008) The Rpb4 subunit of RNA polymerase II contributes to cotranscriptional recruitment of 3' processing factors. Mol Cell Biol 28(6):1883-91 {{SGDpaper|S000125251}} PMID 18195044</ref><ref name='S000086303'>Sampath V and Sadhale P (2005) Rpb4 and Rpb7: a sub-complex integral to multi-subunit RNA polymerases performs a multitude of functions. IUBMB Life 57(2):93-102
+'''Description of YJL140W:''' RNA polymerase II subunit B32; forms two subunit dissociable complex with Rpb7p; involved in recruitment of 3'-end processing factors to transcribing RNA polymerase II complex and in export of mRNA to cytoplasm under stress conditions<ref name='S000057661'>Archambault J and Friesen JD (1993) Genetics of eukaryotic RNA polymerases I, II, and III. Microbiol Rev 57(3):703-24 {{SGDpaper|S000057661}} PMID 8246845</ref><ref name='S000080887'>Choder M (2004) Rpb4 and Rpb7: subunits of RNA polymerase II and beyond. Trends Biochem Sci 29(12):674-81 {{SGDpaper|S000080887}} PMID 15544954</ref><ref name='S000058793'>Cramer P, et al. (2000) Architecture of RNA polymerase II and implications for the transcription mechanism. Science 288(5466):640-9 {{SGDpaper|S000058793}} PMID 10784442</ref><ref name='S000058335'>Hampsey M (1998) Molecular genetics of the RNA polymerase II general transcriptional machinery. Microbiol Mol Biol Rev 62(2):465-503 {{SGDpaper|S000058335}} PMID 9618449</ref><ref name='S000125251'>Runner VM, et al. (2008) The Rpb4 subunit of RNA polymerase II contributes to cotranscriptional recruitment of 3' processing factors. Mol Cell Biol 28(6):1883-91 {{SGDpaper|S000125251}} PMID 18195044</ref><ref name='S000086303'>Sampath V and Sadhale P (2005) Rpb4 and Rpb7: a sub-complex integral to multi-subunit RNA polymerases performs a multitude of functions. IUBMB Life 57(2):93-102
   {{SGDpaper|S000086303}} PMID 16036568</ref>
 <br>

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YJL140W:''' RNA polymerase II subunit B32; forms two subunit dissociable complex with Rpb7p; involved recruitment of 3'-end processing factors to transcribing RNA polymerase II complex and in export of mRNA to cytoplasm under stress conditions<ref name='S000057661'>Archambault J and Friesen JD (1993) Genetics of eukaryotic RNA polymerases I, II, and III. Microbiol Rev 57(3):703-24 {{SGDpaper|S000057661}} PMID 8246845</ref><ref name='S000058793'>Cramer P, et al. (2000) Architecture of RNA polymerase II and implications for the transcription mechanism. Science 288(5466):640-9 {{SGDpaper|S000058793}} PMID 10784442</ref><ref name='S000058335'>Hampsey M (1998) Molecular genetics of the RNA polymerase II general transcriptional machinery. Microbiol Mol Biol Rev 62(2):465-503 {{SGDpaper|S000058335}} PMID 9618449</ref><ref name='S000086303'>Sampath V and Sadhale P (2005) Rpb4 and Rpb7: a sub-complex integral to multi-subunit RNA polymerases performs a multitude of functions. IUBMB Life 57(2):93-102 {{SGDpaper|S000086303}} PMID 16036568</ref><ref name='S000080887'>Choder M (2004) Rpb4 and Rpb7: subunits of RNA polymerase II and beyond. Trends Biochem Sci 29(12):674-81 {{SGDpaper|S000080887}} PMID 15544954</ref><ref name='S000125251'>Runner VM, et al. (2008) The Rpb4 subunit of RNA polymerase II contributes to cotranscriptional recruitment of 3' processing factors. Mol Cell Biol 28(6):1883-91
+'''Description of YJL140W:''' RNA polymerase II subunit B32; forms two subunit dissociable complex with Rpb7p; involved recruitment of 3'-end processing factors to transcribing RNA polymerase II complex and in export of mRNA to cytoplasm under stress conditions<ref name='S000057661'>Archambault J and Friesen JD (1993) Genetics of eukaryotic RNA polymerases I, II, and III. Microbiol Rev 57(3):703-24 {{SGDpaper|S000057661}} PMID 8246845</ref><ref name='S000080887'>Choder M (2004) Rpb4 and Rpb7: subunits of RNA polymerase II and beyond. Trends Biochem Sci 29(12):674-81 {{SGDpaper|S000080887}} PMID 15544954</ref><ref name='S000058793'>Cramer P, et al. (2000) Architecture of RNA polymerase II and implications for the transcription mechanism. Science 288(5466):640-9 {{SGDpaper|S000058793}} PMID 10784442</ref><ref name='S000058335'>Hampsey M (1998) Molecular genetics of the RNA polymerase II general transcriptional machinery. Microbiol Mol Biol Rev 62(2):465-503 {{SGDpaper|S000058335}} PMID 9618449</ref><ref name='S000125251'>Runner VM, et al. (2008) The Rpb4 subunit of RNA polymerase II contributes to cotranscriptional recruitment of 3' processing factors. Mol Cell Biol 28(6):1883-91 {{SGDpaper|S000125251}} PMID 18195044</ref><ref name='S000086303'>Sampath V and Sadhale P (2005) Rpb4 and Rpb7: a sub-complex integral to multi-subunit RNA polymerases performs a multitude of functions. IUBMB Life 57(2):93-102
-  {{SGDpaper|S000125251}} PMID 18195044</ref>
+  {{SGDpaper|S000086303}} PMID 16036568</ref>
 <br>
 <br>

@@ Line 4: / Line 4: @@
 {|{{Prettytable}} align = 'right' width = '200px'
 |-
-|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=YJL140W YJL140W]
+|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000003676 YJL140W]
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''         ||''RPB4 ''
@@ Line 14: / Line 14: @@
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 |nowrap| Chr X:150958..151623
 |}
 <br>
-'''Description of {{PAGENAME}}:''' RNA polymerase II subunit B32; forms two subunit dissociable complex with Rpb7p; dispensable under some environmental conditions; involved in export of mRNA to cytoplasm under stress conditions; involved in telomere maintenance<ref name='S000114270'>Askree SH, et al. (2004) A genome-wide screen for Saccharomyces cerevisiae deletion mutants that affect telomere length. Proc Natl Acad Sci U S A 101(23):8658-63 {{SGDpaper|S000114270}} PMID 15161972</ref><ref name='S000080887'>Choder M (2004) Rpb4 and Rpb7: subunits of RNA polymerase II and beyond. Trends Biochem Sci 29(12):674-81 {{SGDpaper|S000080887}} PMID 15544954</ref><ref name='S000058793'>Cramer P, et al. (2000) Architecture of RNA polymerase II and implications for the transcription mechanism. Science 288(5466):640-9 {{SGDpaper|S000058793}} PMID 10784442</ref><ref name='S000058335'>Hampsey M (1998) Molecular genetics of the RNA polymerase II general transcriptional machinery. Microbiol Mol Biol Rev 62(2):465-503 {{SGDpaper|S000058335}} PMID 9618449</ref><ref name='S000057661'>Archambault J and Friesen JD (1993) Genetics of eukaryotic RNA polymerases I, II, and III. Microbiol Rev 57(3):703-24
+'''Description of YJL140W:''' RNA polymerase II subunit B32; forms two subunit dissociable complex with Rpb7p; dispensable under some environmental conditions; involved in export of mRNA to cytoplasm under stress conditions; involved in telomere maintenance<ref name='S000114270'>Askree SH, et al. (2004) A genome-wide screen for Saccharomyces cerevisiae deletion mutants that affect telomere length. Proc Natl Acad Sci U S A 101(23):8658-63 {{SGDpaper|S000114270}} PMID 15161972</ref><ref name='S000080887'>Choder M (2004) Rpb4 and Rpb7: subunits of RNA polymerase II and beyond. Trends Biochem Sci 29(12):674-81 {{SGDpaper|S000080887}} PMID 15544954</ref><ref name='S000058793'>Cramer P, et al. (2000) Architecture of RNA polymerase II and implications for the transcription mechanism. Science 288(5466):640-9 {{SGDpaper|S000058793}} PMID 10784442</ref><ref name='S000058335'>Hampsey M (1998) Molecular genetics of the RNA polymerase II general transcriptional machinery. Microbiol Mol Biol Rev 62(2):465-503 {{SGDpaper|S000058335}} PMID 9618449</ref><ref name='S000057661'>Archambault J and Friesen JD (1993) Genetics of eukaryotic RNA polymerases I, II, and III. Microbiol Rev 57(3):703-24
   {{SGDpaper|S000057661}} PMID 8246845</ref>
 <br>
@@ Line 37: / Line 39: @@
 J Biol Chem 278(5):3265-74</ref>
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← Older revision		Revision as of 20:02, 21 February 2007
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		+	<!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation -->
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		+	Specifically higher expression in carbon limited chemostat cultures versus carbon excess.
		+	<ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur.
		+	J Biol Chem 278(5):3265-74</ref>
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