YJL113W - Revision history

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{{PageTop}}
{|{{Prettytable}} align = 'right' width = '200px'
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=YJL113W YJL113W]
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||'' ''
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases''' ||'' ''
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type''' || transposable_element_gene[[Category:transposable_element_gene]]
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
|nowrap| Chr X:197913..203325
|-
|colspan = '3'|{{Don'tEditThisBox}}
|}
 
'''Description of {{PAGENAME}}:''' Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes<ref name='S000113968'>Stucka R, et al. (1992) Molecular analysis of the yeast Ty4 element: homology with Ty1, copia, and plant retrotransposons. Gene 122(1):119-28 {{SGDpaper|S000113968}} PMID 1333437</ref><ref name='S000086174'>Lesage P and Todeschini AL (2005) Happy together: the life and times of Ty retrotransposons and their hosts. Cytogenet Genome Res 110(1-4):70-90 {{SGDpaper|S000086174}} PMID 16093660</ref><ref name='S000072465'>Kim JM, et al. (1998) Transposable elements and genome organization: a comprehensive survey of retrotransposons revealed by the complete Saccharomyces cerevisiae genome sequence. Genome Res 8(5):464-78
{{SGDpaper|S000072465}} PMID 9582191</ref>
 
 
 
 

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==Community Commentary==
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==References==

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@@ Line 13: / Line 13: @@
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
-|nowrap| Chr X:197912..203324
+|nowrap| Chr X:198678..203325
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''           || S000003649

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YJL113W:''' Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes<ref name='S000086174'>Lesage P and Todeschini AL (2005) Happy together: the life and times of Ty retrotransposons and their hosts. Cytogenet Genome Res 110(1-4):70-90 {{SGDpaper|S000086174}} PMID 16093660</ref><ref name='S000113968'>Stucka R, et al. (1992) Molecular analysis of the yeast Ty4 element: homology with Ty1, copia, and plant retrotransposons. Gene 122(1):119-28 {{SGDpaper|S000113968}} PMID 1333437</ref><ref name='S000072465'>Kim JM, et al. (1998) Transposable elements and genome organization: a comprehensive survey of retrotransposons revealed by the complete Saccharomyces cerevisiae genome sequence. Genome Res 8(5):464-78
+'''Description of YJL113W:''' Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes<ref name='S000072465'>Kim JM, et al. (1998) Transposable elements and genome organization: a comprehensive survey of retrotransposons revealed by the complete Saccharomyces cerevisiae genome sequence. Genome Res 8(5):464-78 {{SGDpaper|S000072465}} PMID 9582191</ref><ref name='S000086174'>Lesage P and Todeschini AL (2005) Happy together: the life and times of Ty retrotransposons and their hosts. Cytogenet Genome Res 110(1-4):70-90 {{SGDpaper|S000086174}} PMID 16093660</ref><ref name='S000113968'>Stucka R, et al. (1992) Molecular analysis of the yeast Ty4 element: homology with Ty1, copia, and plant retrotransposons. Gene 122(1):119-28
- {{SGDpaper|S000072465}} PMID 9582191</ref>
+ {{SGDpaper|S000113968}} PMID 1333437</ref>
 <br>
 <br>

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YJL113W:''' Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes<ref name='S000113968'>Stucka R, et al. (1992) Molecular analysis of the yeast Ty4 element: homology with Ty1, copia, and plant retrotransposons. Gene 122(1):119-28 {{SGDpaper|S000113968}} PMID 1333437</ref><ref name='S000086174'>Lesage P and Todeschini AL (2005) Happy together: the life and times of Ty retrotransposons and their hosts. Cytogenet Genome Res 110(1-4):70-90 {{SGDpaper|S000086174}} PMID 16093660</ref><ref name='S000072465'>Kim JM, et al. (1998) Transposable elements and genome organization: a comprehensive survey of retrotransposons revealed by the complete Saccharomyces cerevisiae genome sequence. Genome Res 8(5):464-78
+'''Description of YJL113W:''' Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes<ref name='S000086174'>Lesage P and Todeschini AL (2005) Happy together: the life and times of Ty retrotransposons and their hosts. Cytogenet Genome Res 110(1-4):70-90 {{SGDpaper|S000086174}} PMID 16093660</ref><ref name='S000113968'>Stucka R, et al. (1992) Molecular analysis of the yeast Ty4 element: homology with Ty1, copia, and plant retrotransposons. Gene 122(1):119-28 {{SGDpaper|S000113968}} PMID 1333437</ref><ref name='S000072465'>Kim JM, et al. (1998) Transposable elements and genome organization: a comprehensive survey of retrotransposons revealed by the complete Saccharomyces cerevisiae genome sequence. Genome Res 8(5):464-78
   {{SGDpaper|S000072465}} PMID 9582191</ref>
 <br>

@@ Line 13: / Line 13: @@
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
-|nowrap| Chr X:197913..203325
+|nowrap| Chr X:197912..203324
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''           || S000003649

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		+	<!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation -->
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		+	Specifically higher expression in carbon limited chemostat cultures versus carbon excess.
		+	<ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur.
		+	J Biol Chem 278(5):3265-74</ref>
		+	-->

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 {|{{Prettytable}} align = 'right' width = '200px'
 |-
-|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000003649 YJL113W]
+|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000003649 YJL113W]
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''         ||'' ''

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 ==Community Commentary==
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 ==References==
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