YJL103C - Revision history

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{{PageTop}}
{|{{Prettytable}} align = 'right' width = '200px'
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=YJL103C YJL103C]
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''GSM1 ''
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases''' ||'' ''
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type''' || ORF, Uncharacterized[[Category:ORF]][[Category:ORF, Uncharacterized]]
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
|nowrap| Chr X:230877..229021
|-
|colspan = '3'|{{Don'tEditThisBox}}
|}
 
'''Description of {{PAGENAME}}:''' Putative zinc cluster protein of unknown function; proposed to be involved in the regulation of energy metabolism, based on patterns of expression and sequence analysis<ref name='S000117824'>Radonjic M, et al. (2006) Integrative Genomic Analysis Characterizes a Novel Regulator of the S. cerevisiae Starvation Response () {{SGDpaper|S000117824}} PMID </ref><ref name='S000116789'>Ho SW, et al. (2006) Linking DNA-binding proteins to their recognition sequences by using protein microarrays. Proc Natl Acad Sci U S A 103(26):9940-5 {{SGDpaper|S000116789}} PMID 16785442</ref><ref name='S000081742'>Deng Y, et al. (2005) Computationally analyzing the possible biological function of YJL103C--an ORF potentially involved in the regulation of energy process in yeast. Int J Mol Med 15(1):123-7 {{SGDpaper|S000081742}} PMID 15583838</ref><ref name='S000042419'>Todd RB and Andrianopoulos A (1997) Evolution of a fungal regulatory gene family: the Zn(II)2Cys6 binuclear cluster DNA binding motif. Fungal Genet Biol 21(3):388-405
{{SGDpaper|S000042419}} PMID 9290251</ref>
 
 
 
 

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==Community Commentary==
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==References==

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@@ Line 13: / Line 13: @@
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
-|nowrap| Chr X:230876..229020
+|nowrap| Chr X:230881..229025
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''           || S000003639

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YJL103C:''' Putative zinc cluster protein of unknown function; proposed to be involved in the regulation of energy metabolism, based on patterns of expression and sequence analysis<ref name='S000042419'>Todd RB and Andrianopoulos A (1997) Evolution of a fungal regulatory gene family: the Zn(II)2Cys6 binuclear cluster DNA binding motif. Fungal Genet Biol 21(3):388-405 {{SGDpaper|S000042419}} PMID 9290251</ref><ref name='S000081742'>Deng Y, et al. (2005) Computationally analyzing the possible biological function of YJL103C--an ORF potentially involved in the regulation of energy process in yeast. Int J Mol Med 15(1):123-7 {{SGDpaper|S000081742}} PMID 15583838</ref><ref name='S000116789'>Ho SW, et al. (2006) Linking DNA-binding proteins to their recognition sequences by using protein microarrays. Proc Natl Acad Sci U S A 103(26):9940-5 {{SGDpaper|S000116789}} PMID 16785442</ref><ref name='S000125221'>van Bakel H, et al. (2008) Improved genome-wide localization by ChIP-chip using double-round T7 RNA polymerase-based amplification. Nucleic Acids Res 36(4):e21
+'''Description of YJL103C:''' Putative zinc cluster protein of unknown function; proposed to be involved in the regulation of energy metabolism, based on patterns of expression and sequence analysis<ref name='S000081742'>Deng Y, et al. (2005) Computationally analyzing the possible biological function of YJL103C--an ORF potentially involved in the regulation of energy process in yeast. Int J Mol Med 15(1):123-7 {{SGDpaper|S000081742}} PMID 15583838</ref><ref name='S000116789'>Ho SW, et al. (2006) Linking DNA-binding proteins to their recognition sequences by using protein microarrays. Proc Natl Acad Sci U S A 103(26):9940-5 {{SGDpaper|S000116789}} PMID 16785442</ref><ref name='S000042419'>Todd RB and Andrianopoulos A (1997) Evolution of a fungal regulatory gene family: the Zn(II)2Cys6 binuclear cluster DNA binding motif. Fungal Genet Biol 21(3):388-405 {{SGDpaper|S000042419}} PMID 9290251</ref><ref name='S000125221'>van Bakel H, et al. (2008) Improved genome-wide localization by ChIP-chip using double-round T7 RNA polymerase-based amplification. Nucleic Acids Res 36(4):e21
   {{SGDpaper|S000125221}} PMID 18180247</ref>
 <br>

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YJL103C:''' Putative zinc cluster protein of unknown function; proposed to be involved in the regulation of energy metabolism, based on patterns of expression and sequence analysis<ref name='S000125221'>van Bakel H, et al. (2008) Improved genome-wide localization by ChIP-chip using double-round T7 RNA polymerase-based amplification. Nucleic Acids Res 36(4):e21 {{SGDpaper|S000125221}} PMID 18180247</ref><ref name='S000116789'>Ho SW, et al. (2006) Linking DNA-binding proteins to their recognition sequences by using protein microarrays. Proc Natl Acad Sci U S A 103(26):9940-5 {{SGDpaper|S000116789}} PMID 16785442</ref><ref name='S000081742'>Deng Y, et al. (2005) Computationally analyzing the possible biological function of YJL103C--an ORF potentially involved in the regulation of energy process in yeast. Int J Mol Med 15(1):123-7 {{SGDpaper|S000081742}} PMID 15583838</ref><ref name='S000042419'>Todd RB and Andrianopoulos A (1997) Evolution of a fungal regulatory gene family: the Zn(II)2Cys6 binuclear cluster DNA binding motif. Fungal Genet Biol 21(3):388-405
+'''Description of YJL103C:''' Putative zinc cluster protein of unknown function; proposed to be involved in the regulation of energy metabolism, based on patterns of expression and sequence analysis<ref name='S000042419'>Todd RB and Andrianopoulos A (1997) Evolution of a fungal regulatory gene family: the Zn(II)2Cys6 binuclear cluster DNA binding motif. Fungal Genet Biol 21(3):388-405 {{SGDpaper|S000042419}} PMID 9290251</ref><ref name='S000081742'>Deng Y, et al. (2005) Computationally analyzing the possible biological function of YJL103C--an ORF potentially involved in the regulation of energy process in yeast. Int J Mol Med 15(1):123-7 {{SGDpaper|S000081742}} PMID 15583838</ref><ref name='S000116789'>Ho SW, et al. (2006) Linking DNA-binding proteins to their recognition sequences by using protein microarrays. Proc Natl Acad Sci U S A 103(26):9940-5 {{SGDpaper|S000116789}} PMID 16785442</ref><ref name='S000125221'>van Bakel H, et al. (2008) Improved genome-wide localization by ChIP-chip using double-round T7 RNA polymerase-based amplification. Nucleic Acids Res 36(4):e21
-  {{SGDpaper|S000042419}} PMID 9290251</ref>
+  {{SGDpaper|S000125221}} PMID 18180247</ref>
 <br>
 <br>

@@ Line 13: / Line 13: @@
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
-|nowrap| Chr X:230877..229021
+|nowrap| Chr X:230876..229020
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''           || S000003639
 |}
 <br>
-'''Description of YJL103C:''' Putative zinc cluster protein of unknown function; proposed to be involved in the regulation of energy metabolism, based on patterns of expression and sequence analysis<ref name='S000117824'>Radonjic M, et al. (2006) Integrative Genomic Analysis Characterizes a Novel Regulator of the S. cerevisiae Starvation Response  () {{SGDpaper|S000117824}} PMID </ref><ref name='S000116789'>Ho SW, et al. (2006) Linking DNA-binding proteins to their recognition sequences by using protein microarrays. Proc Natl Acad Sci U S A 103(26):9940-5 {{SGDpaper|S000116789}} PMID 16785442</ref><ref name='S000081742'>Deng Y, et al. (2005) Computationally analyzing the possible biological function of YJL103C--an ORF potentially involved in the regulation of energy process in yeast. Int J Mol Med 15(1):123-7 {{SGDpaper|S000081742}} PMID 15583838</ref><ref name='S000042419'>Todd RB and Andrianopoulos A (1997) Evolution of a fungal regulatory gene family: the Zn(II)2Cys6 binuclear cluster DNA binding motif. Fungal Genet Biol 21(3):388-405
+'''Description of YJL103C:''' Putative zinc cluster protein of unknown function; proposed to be involved in the regulation of energy metabolism, based on patterns of expression and sequence analysis<ref name='S000125221'>van Bakel H, et al. (2008) Improved genome-wide localization by ChIP-chip using double-round T7 RNA polymerase-based amplification. Nucleic Acids Res 36(4):e21 {{SGDpaper|S000125221}} PMID 18180247</ref><ref name='S000116789'>Ho SW, et al. (2006) Linking DNA-binding proteins to their recognition sequences by using protein microarrays. Proc Natl Acad Sci U S A 103(26):9940-5 {{SGDpaper|S000116789}} PMID 16785442</ref><ref name='S000081742'>Deng Y, et al. (2005) Computationally analyzing the possible biological function of YJL103C--an ORF potentially involved in the regulation of energy process in yeast. Int J Mol Med 15(1):123-7 {{SGDpaper|S000081742}} PMID 15583838</ref><ref name='S000042419'>Todd RB and Andrianopoulos A (1997) Evolution of a fungal regulatory gene family: the Zn(II)2Cys6 binuclear cluster DNA binding motif. Fungal Genet Biol 21(3):388-405
   {{SGDpaper|S000042419}} PMID 9290251</ref>
 <br>

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		+	<!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation -->
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		+	Specifically higher expression in carbon limited chemostat cultures versus carbon excess.
		+	<ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur.
		+	J Biol Chem 278(5):3265-74</ref>
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 {|{{Prettytable}} align = 'right' width = '200px'
 |-
-|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000003639 YJL103C]
+|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000003639 YJL103C]
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''         ||''GSM1 ''

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 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases'''           ||'' ''
 |-
-|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type'''           || ORF, Uncharacterized[[Category:ORF]][[Category:ORF, Uncharacterized]]
+|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type'''           || ORF, Verified[[Category:ORF]][[Category:ORF, Verified]]
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''

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 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 |nowrap| Chr X:230877..229021
 |}
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 ==Community Commentary==
 {{CommentaryHelp}}
 ==References==
 <!-- REFERENCES ARE AUTOMATICALLY GENERATED.  PLEASE DON'T EDIT THIS SECTION-->
 {{RefHelp}}