YFR004W - Revision history

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@@ Line 4: / Line 4: @@
 {|{{Prettytable}} align = 'right' width = '200px'
 |-
-|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000001900 YFR004W]
+|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000001900 YFR004W]
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''         ||''RPN11 ''

@@ Line 13: / Line 13: @@
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 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
-|nowrap| Chr VI:153388..154308
+|nowrap| Chr VI:153393..154313
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''           || S000001900

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YFR004W:''' Metalloprotease subunit of the 19S regulatory particle of the 26S proteasome lid; couples the deubiquitination and degradation of proteasome substrates; involved, independent of catalytic activity, in fission of mitochondria and peroxisomes<ref name='S000071711'>Verma R, et al. (2002) Role of Rpn11 metalloprotease in deubiquitination and degradation by the 26S proteasome. Science 298(5593):611-5 {{SGDpaper|S000071711}} PMID 12183636</ref><ref name='S000073690'>Berndt C, et al. (2002) Ubiquitin system: JAMMing in the name of the lid. Curr Biol 12(23):R815-7 {{SGDpaper|S000073690}} PMID 12477409</ref><ref name='S000074981'>Guterman A and Glickman MH (2004) Complementary roles for Rpn11 and Ubp6 in deubiquitination and proteolysis by the proteasome. J Biol Chem 279(3):1729-38 {{SGDpaper|S000074981}} PMID 14581483</ref><ref name='S000131681'>Hofmann L, et al. (2009) A nonproteolytic proteasome activity controls organelle fission in yeast. J Cell Sci 122(Pt 20):3673-83
+'''Description of YFR004W:''' Metalloprotease subunit of the 19S regulatory particle of the 26S proteasome lid; couples the deubiquitination and degradation of proteasome substrates; involved, independent of catalytic activity, in fission of mitochondria and peroxisomes<ref name='S000073690'>Berndt C, et al. (2002) Ubiquitin system: JAMMing in the name of the lid. Curr Biol 12(23):R815-7 {{SGDpaper|S000073690}} PMID 12477409</ref><ref name='S000074981'>Guterman A and Glickman MH (2004) Complementary roles for Rpn11 and Ubp6 in deubiquitination and proteolysis by the proteasome. J Biol Chem 279(3):1729-38 {{SGDpaper|S000074981}} PMID 14581483</ref><ref name='S000131681'>Hofmann L, et al. (2009) A nonproteolytic proteasome activity controls organelle fission in yeast. J Cell Sci 122(Pt 20):3673-83 {{SGDpaper|S000131681}} PMID 19773362</ref><ref name='S000071711'>Verma R, et al. (2002) Role of Rpn11 metalloprotease in deubiquitination and degradation by the 26S proteasome. Science 298(5593):611-5
-  {{SGDpaper|S000131681}} PMID 19773362</ref>
+  {{SGDpaper|S000071711}} PMID 12183636</ref>
 <br>
 <br>

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YFR004W:''' Metalloprotease subunit of the 19S regulatory particle of the 26S proteasome lid; couples the deubiquitination and degradation of proteasome substrates; involved, independent of catalytic activity, in fission of mitochondria and peroxisomes<ref name='S000071711'>Verma R, et al. (2002) Role of Rpn11 metalloprotease in deubiquitination and degradation by the 26S proteasome. Science 298(5593):611-5 {{SGDpaper|S000071711}} PMID 12183636</ref><ref name='S000073690'>Berndt C, et al. (2002) Ubiquitin system: JAMMing in the name of the lid. Curr Biol 12(23):R815-7 {{SGDpaper|S000073690}} PMID 12477409</ref><ref name='S000074981'>Guterman A and Glickman MH (2004) Complementary roles for Rpn11 and Ubp6 in deubiquitination and proteolysis by the proteasome. J Biol Chem 279(3):1729-38 {{SGDpaper|S000074981}} PMID 14581483</ref><ref name='S000131681'>Hofmann L, et al. (2009) A nonproteolytic proteasome activity controls organelle fission in yeast. J Cell Sci
+'''Description of YFR004W:''' Metalloprotease subunit of the 19S regulatory particle of the 26S proteasome lid; couples the deubiquitination and degradation of proteasome substrates; involved, independent of catalytic activity, in fission of mitochondria and peroxisomes<ref name='S000071711'>Verma R, et al. (2002) Role of Rpn11 metalloprotease in deubiquitination and degradation by the 26S proteasome. Science 298(5593):611-5 {{SGDpaper|S000071711}} PMID 12183636</ref><ref name='S000073690'>Berndt C, et al. (2002) Ubiquitin system: JAMMing in the name of the lid. Curr Biol 12(23):R815-7 {{SGDpaper|S000073690}} PMID 12477409</ref><ref name='S000074981'>Guterman A and Glickman MH (2004) Complementary roles for Rpn11 and Ubp6 in deubiquitination and proteolysis by the proteasome. J Biol Chem 279(3):1729-38 {{SGDpaper|S000074981}} PMID 14581483</ref><ref name='S000131681'>Hofmann L, et al. (2009) A nonproteolytic proteasome activity controls organelle fission in yeast. J Cell Sci 122(Pt 20):3673-83
   {{SGDpaper|S000131681}} PMID 19773362</ref>
 <br>

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YFR004W:''' Metalloprotease subunit of the 19S regulatory particle of the 26S proteasome lid; couples the deubiquitination and degradation of proteasome substrates<ref name='S000071711'>Verma R, et al. (2002) Role of Rpn11 metalloprotease in deubiquitination and degradation by the 26S proteasome. Science 298(5593):611-5 {{SGDpaper|S000071711}} PMID 12183636</ref><ref name='S000073690'>Berndt C, et al. (2002) Ubiquitin system: JAMMing in the name of the lid. Curr Biol 12(23):R815-7 {{SGDpaper|S000073690}} PMID 12477409</ref><ref name='S000074981'>Guterman A and Glickman MH (2004) Complementary roles for Rpn11 and Ubp6 in deubiquitination and proteolysis by the proteasome. J Biol Chem 279(3):1729-38
+'''Description of YFR004W:''' Metalloprotease subunit of the 19S regulatory particle of the 26S proteasome lid; couples the deubiquitination and degradation of proteasome substrates; involved, independent of catalytic activity, in fission of mitochondria and peroxisomes<ref name='S000071711'>Verma R, et al. (2002) Role of Rpn11 metalloprotease in deubiquitination and degradation by the 26S proteasome. Science 298(5593):611-5 {{SGDpaper|S000071711}} PMID 12183636</ref><ref name='S000073690'>Berndt C, et al. (2002) Ubiquitin system: JAMMing in the name of the lid. Curr Biol 12(23):R815-7 {{SGDpaper|S000073690}} PMID 12477409</ref><ref name='S000074981'>Guterman A and Glickman MH (2004) Complementary roles for Rpn11 and Ubp6 in deubiquitination and proteolysis by the proteasome. J Biol Chem 279(3):1729-38 {{SGDpaper|S000074981}} PMID 14581483</ref><ref name='S000131681'>Hofmann L, et al. (2009) A nonproteolytic proteasome activity controls organelle fission in yeast. J Cell Sci
-  {{SGDpaper|S000074981}} PMID 14581483</ref>
+  {{SGDpaper|S000131681}} PMID 19773362</ref>
 <br>
 <br>

← Older revision		Revision as of 20:02, 21 February 2007
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		+	<!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation -->
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		+	Specifically higher expression in carbon limited chemostat cultures versus carbon excess.
		+	<ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur.
		+	J Biol Chem 278(5):3265-74</ref>
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