YDR233C - Revision history

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-'''Description of YDR233C:''' ER membrane protein that interacts with Sey1p to maintain ER morphology; interacts with exocyst subunit Sec6p, with Yip3p, and with Sbh1p; null mutant has an altered ER morphology; member of the RTNLA (reticulon-like A) subfamily<ref name='S000115116'>De Craene JO, et al. (2006) Rtn1p is involved in structuring the cortical endoplasmic reticulum. Mol Biol Cell 17(7):3009-20 {{SGDpaper|S000115116}} PMID 16624861</ref><ref name='S000123819'>Feng D, et al. (2007) The transmembrane domain is sufficient for Sbh1p function, its association with the Sec61 complex, and interaction with Rtn1p. J Biol Chem 282(42):30618-28 {{SGDpaper|S000123819}} PMID 17699516</ref><ref name='S000082473'>Geng J, et al. (2005) Saccharomyces cerevisiae Rab-GDI displacement factor ortholog Yip3p forms distinct complexes with the Ypt1 Rab GTPase and the reticulon Rtn1p. Eukaryot Cell 4(7):1166-74 {{SGDpaper|S000082473}} PMID 16002643</ref><ref name='S000131190'>Hu J, et al. (2009) A class of dynamin-like GTPases involved in the generation of the tubular ER network. Cell 138(3):549-61 {{SGDpaper|S000131190}} PMID 19665976</ref><ref name='S000073531'>Oertle T, et al. (2003) A reticular rhapsody: phylogenic evolution and nomenclature of the RTN/Nogo gene family. FASEB J 17(10):1238-47
+'''Description of YDR233C:''' Reticulon protein that stabilizes membrane curvature; interacts with Rtn2p, Yop1p, and Sey1p to maintain tubular ER morphology; involved in nuclear pore assembly; rtn1 rtn2 yop1 triple mutant shows loss of tubular ER; mutant overexpressing RTN1 shows increase in tubular ER; interacts with exocyst subunit Sec6p, with Yip3p, and with Sbh1p; similar to and more abundant than Rtn2p; member of the RTNLA (reticulon-like A) subfamily<ref name='S000129575'>Dawson TR, et al. (2009) ER membrane-bending proteins are necessary for de novo nuclear pore formation. J Cell Biol 184(5):659-75 {{SGDpaper|S000129575}} PMID 19273614</ref><ref name='S000115116'>De Craene JO, et al. (2006) Rtn1p is involved in structuring the cortical endoplasmic reticulum. Mol Biol Cell 17(7):3009-20 {{SGDpaper|S000115116}} PMID 16624861</ref><ref name='S000123819'>Feng D, et al. (2007) The transmembrane domain is sufficient for Sbh1p function, its association with the Sec61 complex, and interaction with Rtn1p. J Biol Chem 282(42):30618-28 {{SGDpaper|S000123819}} PMID 17699516</ref><ref name='S000082473'>Geng J, et al. (2005) Saccharomyces cerevisiae Rab-GDI displacement factor ortholog Yip3p forms distinct complexes with the Ypt1 Rab GTPase and the reticulon Rtn1p. Eukaryot Cell 4(7):1166-74 {{SGDpaper|S000082473}} PMID 16002643</ref><ref name='S000125669'>Hu J, et al. (2008) Membrane proteins of the endoplasmic reticulum induce high-curvature tubules. Science 319(5867):1247-50 {{SGDpaper|S000125669}} PMID 18309084</ref><ref name='S000131190'>Hu J, et al. (2009) A class of dynamin-like GTPases involved in the generation of the tubular ER network. Cell 138(3):549-61 {{SGDpaper|S000131190}} PMID 19665976</ref><ref name='S000073531'>Oertle T, et al. (2003) A reticular rhapsody: phylogenic evolution and nomenclature of the RTN/Nogo gene family. FASEB J 17(10):1238-47 {{SGDpaper|S000073531}} PMID 12832288</ref><ref name='S000126279'>Shibata Y, et al. (2008) The reticulon and dp1/yop1p proteins form immobile oligomers in the tubular endoplasmic reticulum. J Biol Chem 283(27):18892-904 {{SGDpaper|S000126279}} PMID 18442980</ref><ref name='S000114418'>Voeltz GK, et al. (2006) A class of membrane proteins shaping the tubular endoplasmic reticulum. Cell 124(3):573-86 {{SGDpaper|S000114418}} PMID 16469703</ref><ref name='S000145140'>West M, et al. (2011) A 3D analysis of yeast ER structure reveals how ER domains are organized by membrane curvature. J Cell Biol 193(2):333-46
-  {{SGDpaper|S000073531}} PMID 12832288</ref>
+  {{SGDpaper|S000145140}} PMID 21502358</ref>
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 {|{{Prettytable}} align = 'right' width = '200px'
 |-
-|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000002641 YDR233C]
+|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000002641 YDR233C]
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''         ||''RTN1 ''

@@ Line 13: / Line 13: @@
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
-|nowrap| Chr IV:930354..929467
+|nowrap| Chr IV:930357..929470
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''           || S000002641

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YDR233C:''' ER membrane protein that interacts with Sey1p to maintain ER morphology; interacts with exocyst subunit Sec6p, with Yip3p, and with Sbh1p; null mutant has an altered ER morphology; member of the RTNLA (reticulon-like A) subfamily<ref name='S000082473'>Geng J, et al. (2005) Saccharomyces cerevisiae Rab-GDI displacement factor ortholog Yip3p forms distinct complexes with the Ypt1 Rab GTPase and the reticulon Rtn1p. Eukaryot Cell 4(7):1166-74 {{SGDpaper|S000082473}} PMID 16002643</ref><ref name='S000115116'>De Craene JO, et al. (2006) Rtn1p is involved in structuring the cortical endoplasmic reticulum. Mol Biol Cell 17(7):3009-20 {{SGDpaper|S000115116}} PMID 16624861</ref><ref name='S000073531'>Oertle T, et al. (2003) A reticular rhapsody: phylogenic evolution and nomenclature of the RTN/Nogo gene family. FASEB J 17(10):1238-47 {{SGDpaper|S000073531}} PMID 12832288</ref><ref name='S000123819'>Feng D, et al. (2007) The transmembrane domain is sufficient for Sbh1p function, its association with the Sec61 complex, and interaction with Rtn1p. J Biol Chem 282(42):30618-28 {{SGDpaper|S000123819}} PMID 17699516</ref><ref name='S000131190'>Hu J, et al. (2009) A class of dynamin-like GTPases involved in the generation of the tubular ER network. Cell 138(3):549-61
+'''Description of YDR233C:''' ER membrane protein that interacts with Sey1p to maintain ER morphology; interacts with exocyst subunit Sec6p, with Yip3p, and with Sbh1p; null mutant has an altered ER morphology; member of the RTNLA (reticulon-like A) subfamily<ref name='S000115116'>De Craene JO, et al. (2006) Rtn1p is involved in structuring the cortical endoplasmic reticulum. Mol Biol Cell 17(7):3009-20 {{SGDpaper|S000115116}} PMID 16624861</ref><ref name='S000123819'>Feng D, et al. (2007) The transmembrane domain is sufficient for Sbh1p function, its association with the Sec61 complex, and interaction with Rtn1p. J Biol Chem 282(42):30618-28 {{SGDpaper|S000123819}} PMID 17699516</ref><ref name='S000082473'>Geng J, et al. (2005) Saccharomyces cerevisiae Rab-GDI displacement factor ortholog Yip3p forms distinct complexes with the Ypt1 Rab GTPase and the reticulon Rtn1p. Eukaryot Cell 4(7):1166-74 {{SGDpaper|S000082473}} PMID 16002643</ref><ref name='S000131190'>Hu J, et al. (2009) A class of dynamin-like GTPases involved in the generation of the tubular ER network. Cell 138(3):549-61 {{SGDpaper|S000131190}} PMID 19665976</ref><ref name='S000073531'>Oertle T, et al. (2003) A reticular rhapsody: phylogenic evolution and nomenclature of the RTN/Nogo gene family. FASEB J 17(10):1238-47
-  {{SGDpaper|S000131190}} PMID 19665976</ref>
+  {{SGDpaper|S000073531}} PMID 12832288</ref>
 <br>
 <br>

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YDR233C:''' ER membrane protein that interacts with exocyst subunit Sec6p and with Yip3p; also interacts with Sbh1p; null mutant has an altered (mostly cisternal) ER morphology; member of the RTNLA (reticulon-like A) subfamily<ref name='S000082473'>Geng J, et al. (2005) Saccharomyces cerevisiae Rab-GDI displacement factor ortholog Yip3p forms distinct complexes with the Ypt1 Rab GTPase and the reticulon Rtn1p. Eukaryot Cell 4(7):1166-74 {{SGDpaper|S000082473}} PMID 16002643</ref><ref name='S000115116'>De Craene JO, et al. (2006) Rtn1p is involved in structuring the cortical endoplasmic reticulum. Mol Biol Cell 17(7):3009-20 {{SGDpaper|S000115116}} PMID 16624861</ref><ref name='S000073531'>Oertle T, et al. (2003) A reticular rhapsody: phylogenic evolution and nomenclature of the RTN/Nogo gene family. FASEB J 17(10):1238-47 {{SGDpaper|S000073531}} PMID 12832288</ref><ref name='S000123819'>Feng D, et al. (2007) The transmembrane domain is sufficient for Sbh1p function, its association with the Sec61 complex, and interaction with Rtn1p. J Biol Chem 282(42):30618-28
+'''Description of YDR233C:''' ER membrane protein that interacts with Sey1p to maintain ER morphology; interacts with exocyst subunit Sec6p, with Yip3p, and with Sbh1p; null mutant has an altered ER morphology; member of the RTNLA (reticulon-like A) subfamily<ref name='S000082473'>Geng J, et al. (2005) Saccharomyces cerevisiae Rab-GDI displacement factor ortholog Yip3p forms distinct complexes with the Ypt1 Rab GTPase and the reticulon Rtn1p. Eukaryot Cell 4(7):1166-74 {{SGDpaper|S000082473}} PMID 16002643</ref><ref name='S000115116'>De Craene JO, et al. (2006) Rtn1p is involved in structuring the cortical endoplasmic reticulum. Mol Biol Cell 17(7):3009-20 {{SGDpaper|S000115116}} PMID 16624861</ref><ref name='S000073531'>Oertle T, et al. (2003) A reticular rhapsody: phylogenic evolution and nomenclature of the RTN/Nogo gene family. FASEB J 17(10):1238-47 {{SGDpaper|S000073531}} PMID 12832288</ref><ref name='S000123819'>Feng D, et al. (2007) The transmembrane domain is sufficient for Sbh1p function, its association with the Sec61 complex, and interaction with Rtn1p. J Biol Chem 282(42):30618-28 {{SGDpaper|S000123819}} PMID 17699516</ref><ref name='S000131190'>Hu J, et al. (2009) A class of dynamin-like GTPases involved in the generation of the tubular ER network. Cell 138(3):549-61
-  {{SGDpaper|S000123819}} PMID 17699516</ref>
+  {{SGDpaper|S000131190}} PMID 19665976</ref>
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