YCR077C - Revision history

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{{PageTop}}
{|{{Prettytable}} align = 'right' width = '200px'
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=YCR077C YCR077C]
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''PAT1 ''
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases''' ||''MRT1''
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type''' || ORF, Verified[[Category:ORF]][[Category:ORF, Verified]]
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
|nowrap| Chr III:252625..250235
|-
|colspan = '3'|{{Don'tEditThisBox}}
|}
 
'''Description of {{PAGENAME}}:''' Topoisomerase II-associated deadenylation-dependent mRNA-decapping factor; also required for faithful chromosome transmission, maintenance of rDNA locus stability, and protection of mRNA 3'-UTRs from trimming; functionally linked to Pab1p<ref name='S000073579'>Noueiry AO, et al. (2003) Yeast Lsm1p-7p/Pat1p deadenylation-dependent mRNA-decapping factors are required for brome mosaic virus genomic RNA translation. Mol Cell Biol 23(12):4094-106 {{SGDpaper|S000073579}} PMID 12773554</ref><ref name='S000055552'>Wang X, et al. (1996) Pat1: a topoisomerase II-associated protein required for faithful chromosome transmission in Saccharomyces cerevisiae. Nucleic Acids Res 24(23):4791-7 {{SGDpaper|S000055552}} PMID 8972867</ref><ref name='S000045302'>Bonnerot C, et al. (2000) The two proteins Pat1p (Mrt1p) and Spb8p interact in vivo, are required for mRNA decay, and are functionally linked to Pab1p. Mol Cell Biol 20(16):5939-46 {{SGDpaper|S000045302}} PMID 10913177</ref><ref name='S000045012'>Wang X, et al. (1999) The topoisomerase II-associated protein, Pat1p, is required for maintenance of rDNA locus stability in Saccharomyces cerevisiae. Mol Gen Genet 261(4-5):831-40
{{SGDpaper|S000045012}} PMID 10394921</ref>
 
 
 
 

__TOC__
==Community Commentary==
{{CommentaryHelp}}

==References==

{{RefHelp}}

@@ Line 13: / Line 13: @@
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
-|nowrap| Chr III:252625..250235
+|nowrap| Chr III:252628..250238
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''           || S000000673

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YCR077C:''' Topoisomerase II-associated deadenylation-dependent mRNA-decapping factor; also required for faithful chromosome transmission, maintenance of rDNA locus stability, and protection of mRNA 3'-UTRs from trimming; functionally linked to Pab1p<ref name='S000045012'>Wang X, et al. (1999) The topoisomerase II-associated protein, Pat1p, is required for maintenance of rDNA locus stability in Saccharomyces cerevisiae. Mol Gen Genet 261(4-5):831-40 {{SGDpaper|S000045012}} PMID 10394921</ref><ref name='S000045302'>Bonnerot C, et al. (2000) The two proteins Pat1p (Mrt1p) and Spb8p interact in vivo, are required for mRNA decay, and are functionally linked to Pab1p. Mol Cell Biol 20(16):5939-46 {{SGDpaper|S000045302}} PMID 10913177</ref><ref name='S000055552'>Wang X, et al. (1996) Pat1: a topoisomerase II-associated protein required for faithful chromosome transmission in Saccharomyces cerevisiae. Nucleic Acids Res 24(23):4791-7 {{SGDpaper|S000055552}} PMID 8972867</ref><ref name='S000073579'>Noueiry AO, et al. (2003) Yeast Lsm1p-7p/Pat1p deadenylation-dependent mRNA-decapping factors are required for brome mosaic virus genomic RNA translation. Mol Cell Biol 23(12):4094-106
+'''Description of YCR077C:''' Topoisomerase II-associated deadenylation-dependent mRNA-decapping factor; also required for faithful chromosome transmission, maintenance of rDNA locus stability, and protection of mRNA 3'-UTRs from trimming; functionally linked to Pab1p<ref name='S000045302'>Bonnerot C, et al. (2000) The two proteins Pat1p (Mrt1p) and Spb8p interact in vivo, are required for mRNA decay, and are functionally linked to Pab1p. Mol Cell Biol 20(16):5939-46 {{SGDpaper|S000045302}} PMID 10913177</ref><ref name='S000073579'>Noueiry AO, et al. (2003) Yeast Lsm1p-7p/Pat1p deadenylation-dependent mRNA-decapping factors are required for brome mosaic virus genomic RNA translation. Mol Cell Biol 23(12):4094-106 {{SGDpaper|S000073579}} PMID 12773554</ref><ref name='S000055552'>Wang X, et al. (1996) Pat1: a topoisomerase II-associated protein required for faithful chromosome transmission in Saccharomyces cerevisiae. Nucleic Acids Res 24(23):4791-7 {{SGDpaper|S000055552}} PMID 8972867</ref><ref name='S000045012'>Wang X, et al. (1999) The topoisomerase II-associated protein, Pat1p, is required for maintenance of rDNA locus stability in Saccharomyces cerevisiae. Mol Gen Genet 261(4-5):831-40
-  {{SGDpaper|S000073579}} PMID 12773554</ref>
+  {{SGDpaper|S000045012}} PMID 10394921</ref>
 <br>
 <br>

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YCR077C:''' Topoisomerase II-associated deadenylation-dependent mRNA-decapping factor; also required for faithful chromosome transmission, maintenance of rDNA locus stability, and protection of mRNA 3'-UTRs from trimming; functionally linked to Pab1p<ref name='S000073579'>Noueiry AO, et al. (2003) Yeast Lsm1p-7p/Pat1p deadenylation-dependent mRNA-decapping factors are required for brome mosaic virus genomic RNA translation. Mol Cell Biol 23(12):4094-106 {{SGDpaper|S000073579}} PMID 12773554</ref><ref name='S000055552'>Wang X, et al. (1996) Pat1: a topoisomerase II-associated protein required for faithful chromosome transmission in Saccharomyces cerevisiae. Nucleic Acids Res 24(23):4791-7 {{SGDpaper|S000055552}} PMID 8972867</ref><ref name='S000045302'>Bonnerot C, et al. (2000) The two proteins Pat1p (Mrt1p) and Spb8p interact in vivo, are required for mRNA decay, and are functionally linked to Pab1p. Mol Cell Biol 20(16):5939-46 {{SGDpaper|S000045302}} PMID 10913177</ref><ref name='S000045012'>Wang X, et al. (1999) The topoisomerase II-associated protein, Pat1p, is required for maintenance of rDNA locus stability in Saccharomyces cerevisiae. Mol Gen Genet 261(4-5):831-40
+'''Description of YCR077C:''' Topoisomerase II-associated deadenylation-dependent mRNA-decapping factor; also required for faithful chromosome transmission, maintenance of rDNA locus stability, and protection of mRNA 3'-UTRs from trimming; functionally linked to Pab1p<ref name='S000045012'>Wang X, et al. (1999) The topoisomerase II-associated protein, Pat1p, is required for maintenance of rDNA locus stability in Saccharomyces cerevisiae. Mol Gen Genet 261(4-5):831-40 {{SGDpaper|S000045012}} PMID 10394921</ref><ref name='S000045302'>Bonnerot C, et al. (2000) The two proteins Pat1p (Mrt1p) and Spb8p interact in vivo, are required for mRNA decay, and are functionally linked to Pab1p. Mol Cell Biol 20(16):5939-46 {{SGDpaper|S000045302}} PMID 10913177</ref><ref name='S000055552'>Wang X, et al. (1996) Pat1: a topoisomerase II-associated protein required for faithful chromosome transmission in Saccharomyces cerevisiae. Nucleic Acids Res 24(23):4791-7 {{SGDpaper|S000055552}} PMID 8972867</ref><ref name='S000073579'>Noueiry AO, et al. (2003) Yeast Lsm1p-7p/Pat1p deadenylation-dependent mRNA-decapping factors are required for brome mosaic virus genomic RNA translation. Mol Cell Biol 23(12):4094-106
-  {{SGDpaper|S000045012}} PMID 10394921</ref>
+  {{SGDpaper|S000073579}} PMID 12773554</ref>
 <br>
 <br>

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YCR077C:''' Topoisomerase II-associated deadenylation-dependent mRNA-decapping factor; also required for faithful chromosome transmission, maintenance of rDNA locus stability, and protection of mRNA 3'-UTRs from trimming; functionally linked to Pab1p<ref name='S000045012'>Wang X, et al. (1999) The topoisomerase II-associated protein, Pat1p, is required for maintenance of rDNA locus stability in Saccharomyces cerevisiae. Mol Gen Genet 261(4-5):831-40 {{SGDpaper|S000045012}} PMID 10394921</ref><ref name='S000045302'>Bonnerot C, et al. (2000) The two proteins Pat1p (Mrt1p) and Spb8p interact in vivo, are required for mRNA decay, and are functionally linked to Pab1p. Mol Cell Biol 20(16):5939-46 {{SGDpaper|S000045302}} PMID 10913177</ref><ref name='S000055552'>Wang X, et al. (1996) Pat1: a topoisomerase II-associated protein required for faithful chromosome transmission in Saccharomyces cerevisiae. Nucleic Acids Res 24(23):4791-7 {{SGDpaper|S000055552}} PMID 8972867</ref><ref name='S000073579'>Noueiry AO, et al. (2003) Yeast Lsm1p-7p/Pat1p deadenylation-dependent mRNA-decapping factors are required for brome mosaic virus genomic RNA translation. Mol Cell Biol 23(12):4094-106
+'''Description of YCR077C:''' Topoisomerase II-associated deadenylation-dependent mRNA-decapping factor; also required for faithful chromosome transmission, maintenance of rDNA locus stability, and protection of mRNA 3'-UTRs from trimming; functionally linked to Pab1p<ref name='S000073579'>Noueiry AO, et al. (2003) Yeast Lsm1p-7p/Pat1p deadenylation-dependent mRNA-decapping factors are required for brome mosaic virus genomic RNA translation. Mol Cell Biol 23(12):4094-106 {{SGDpaper|S000073579}} PMID 12773554</ref><ref name='S000055552'>Wang X, et al. (1996) Pat1: a topoisomerase II-associated protein required for faithful chromosome transmission in Saccharomyces cerevisiae. Nucleic Acids Res 24(23):4791-7 {{SGDpaper|S000055552}} PMID 8972867</ref><ref name='S000045302'>Bonnerot C, et al. (2000) The two proteins Pat1p (Mrt1p) and Spb8p interact in vivo, are required for mRNA decay, and are functionally linked to Pab1p. Mol Cell Biol 20(16):5939-46 {{SGDpaper|S000045302}} PMID 10913177</ref><ref name='S000045012'>Wang X, et al. (1999) The topoisomerase II-associated protein, Pat1p, is required for maintenance of rDNA locus stability in Saccharomyces cerevisiae. Mol Gen Genet 261(4-5):831-40
-  {{SGDpaper|S000073579}} PMID 12773554</ref>
+  {{SGDpaper|S000045012}} PMID 10394921</ref>
 <br>
 <br>

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YCR077C:''' Topoisomerase II-associated deadenylation-dependent mRNA-decapping factor; also required for faithful chromosome transmission, maintenance of rDNA locus stability, and protection of mRNA 3'-UTRs from trimming; functionally linked to Pab1p<ref name='S000073579'>Noueiry AO, et al. (2003) Yeast Lsm1p-7p/Pat1p deadenylation-dependent mRNA-decapping factors are required for brome mosaic virus genomic RNA translation. Mol Cell Biol 23(12):4094-106 {{SGDpaper|S000073579}} PMID 12773554</ref><ref name='S000055552'>Wang X, et al. (1996) Pat1: a topoisomerase II-associated protein required for faithful chromosome transmission in Saccharomyces cerevisiae. Nucleic Acids Res 24(23):4791-7 {{SGDpaper|S000055552}} PMID 8972867</ref><ref name='S000045302'>Bonnerot C, et al. (2000) The two proteins Pat1p (Mrt1p) and Spb8p interact in vivo, are required for mRNA decay, and are functionally linked to Pab1p. Mol Cell Biol 20(16):5939-46 {{SGDpaper|S000045302}} PMID 10913177</ref><ref name='S000045012'>Wang X, et al. (1999) The topoisomerase II-associated protein, Pat1p, is required for maintenance of rDNA locus stability in Saccharomyces cerevisiae. Mol Gen Genet 261(4-5):831-40
+'''Description of YCR077C:''' Topoisomerase II-associated deadenylation-dependent mRNA-decapping factor; also required for faithful chromosome transmission, maintenance of rDNA locus stability, and protection of mRNA 3'-UTRs from trimming; functionally linked to Pab1p<ref name='S000045012'>Wang X, et al. (1999) The topoisomerase II-associated protein, Pat1p, is required for maintenance of rDNA locus stability in Saccharomyces cerevisiae. Mol Gen Genet 261(4-5):831-40 {{SGDpaper|S000045012}} PMID 10394921</ref><ref name='S000045302'>Bonnerot C, et al. (2000) The two proteins Pat1p (Mrt1p) and Spb8p interact in vivo, are required for mRNA decay, and are functionally linked to Pab1p. Mol Cell Biol 20(16):5939-46 {{SGDpaper|S000045302}} PMID 10913177</ref><ref name='S000055552'>Wang X, et al. (1996) Pat1: a topoisomerase II-associated protein required for faithful chromosome transmission in Saccharomyces cerevisiae. Nucleic Acids Res 24(23):4791-7 {{SGDpaper|S000055552}} PMID 8972867</ref><ref name='S000073579'>Noueiry AO, et al. (2003) Yeast Lsm1p-7p/Pat1p deadenylation-dependent mRNA-decapping factors are required for brome mosaic virus genomic RNA translation. Mol Cell Biol 23(12):4094-106
-  {{SGDpaper|S000045012}} PMID 10394921</ref>
+  {{SGDpaper|S000073579}} PMID 12773554</ref>
 <br>
 <br>

@@ Line 4: / Line 4: @@
 {|{{Prettytable}} align = 'right' width = '200px'
 |-
-|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000000673 YCR077C]
+|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000000673 YCR077C]
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''         ||''PAT1 ''

← Older revision		Revision as of 20:02, 21 February 2007
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		+	<!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation -->
		+	<!--
		+	Specifically higher expression in carbon limited chemostat cultures versus carbon excess.
		+	<ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur.
		+	J Biol Chem 278(5):3265-74</ref>
		+	-->

	<protect>		<protect>

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 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 |nowrap| Chr III:252625..250235
 |}
 <br>
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+<br>
 __TOC__
 ==Community Commentary==
 {{CommentaryHelp}}
 ==References==
 <!-- REFERENCES ARE AUTOMATICALLY GENERATED.  PLEASE DON'T EDIT THIS SECTION-->
 {{RefHelp}}