YBL002W - Revision history

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@@ Line 4: / Line 4: @@
 {|{{Prettytable}} align = 'right' width = '200px'
 |-
-|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000000098 YBL002W]
+|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000000098 YBL002W]
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''         ||''HTB2 ''

@@ Line 13: / Line 13: @@
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
-|nowrap| Chr II:236495..236890
+|nowrap| Chr II:236492..236887
 |-
 |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''           || S000000098

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YBL002W:''' Histone H2B, core histone protein required for chromatin assembly and chromosome function; nearly identical to HTB1; Rad6p-Bre1p-Lge1p mediated ubiquitination regulates transcriptional activation, meiotic DSB formation and H3 methylation<ref name='S000039551'>Robzyk K, et al. (2000) Rad6-dependent ubiquitination of histone H2B in yeast. Science 287(5452):501-4 {{SGDpaper|S000039551}} PMID 10642555</ref><ref name='S000075526'>Kao CF, et al. (2004) Rad6 plays a role in transcriptional activation through ubiquitylation of histone H2B. Genes Dev 18(2):184-95 {{SGDpaper|S000075526}} PMID 14752010</ref><ref name='S000076743'>Yamashita K, et al. (2004) Rad6-Bre1-mediated histone H2B ubiquitylation modulates the formation of double-strand breaks during meiosis. Proc Natl Acad Sci U S A 101(31):11380-5 {{SGDpaper|S000076743}} PMID 15280549</ref><ref name='S000070308'>Dover J, et al. (2002) Methylation of histone H3 by COMPASS requires ubiquitination of histone H2B by Rad6. J Biol Chem 277(32):28368-71 {{SGDpaper|S000070308}} PMID 12070136</ref><ref name='S000070336'>Briggs SD, et al. (2002) Gene silencing: trans-histone regulatory pathway in chromatin. Nature 418(6897):498 {{SGDpaper|S000070336}} PMID 12152067</ref><ref name='S000069711'>Martini EM, et al. (2002) A role for histone H2B during repair of UV-induced DNA damage in Saccharomyces cerevisiae. Genetics 160(4):1375-87 {{SGDpaper|S000069711}} PMID 11973294</ref><ref name='S000072664'>Hwang WW, et al. (2003) A conserved RING finger protein required for histone H2B monoubiquitination and cell size control. Mol Cell 11(1):261-6
+'''Description of YBL002W:''' Histone H2B, core histone protein required for chromatin assembly and chromosome function; nearly identical to HTB1; Rad6p-Bre1p-Lge1p mediated ubiquitination regulates transcriptional activation, meiotic DSB formation and H3 methylation<ref name='S000070336'>Briggs SD, et al. (2002) Gene silencing: trans-histone regulatory pathway in chromatin. Nature 418(6897):498 {{SGDpaper|S000070336}} PMID 12152067</ref><ref name='S000070308'>Dover J, et al. (2002) Methylation of histone H3 by COMPASS requires ubiquitination of histone H2B by Rad6. J Biol Chem 277(32):28368-71 {{SGDpaper|S000070308}} PMID 12070136</ref><ref name='S000072664'>Hwang WW, et al. (2003) A conserved RING finger protein required for histone H2B monoubiquitination and cell size control. Mol Cell 11(1):261-6 {{SGDpaper|S000072664}} PMID 12535538</ref><ref name='S000075526'>Kao CF, et al. (2004) Rad6 plays a role in transcriptional activation through ubiquitylation of histone H2B. Genes Dev 18(2):184-95 {{SGDpaper|S000075526}} PMID 14752010</ref><ref name='S000069711'>Martini EM, et al. (2002) A role for histone H2B during repair of UV-induced DNA damage in Saccharomyces cerevisiae. Genetics 160(4):1375-87 {{SGDpaper|S000069711}} PMID 11973294</ref><ref name='S000039551'>Robzyk K, et al. (2000) Rad6-dependent ubiquitination of histone H2B in yeast. Science 287(5452):501-4 {{SGDpaper|S000039551}} PMID 10642555</ref><ref name='S000076743'>Yamashita K, et al. (2004) Rad6-Bre1-mediated histone H2B ubiquitylation modulates the formation of double-strand breaks during meiosis. Proc Natl Acad Sci U S A 101(31):11380-5
-  {{SGDpaper|S000072664}} PMID 12535538</ref>
+  {{SGDpaper|S000076743}} PMID 15280549</ref>
 <br>
 <br>

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YBL002W:''' Histone H2B, core histone protein required for chromatin assembly and chromosome function; nearly identical to HTB1; Rad6p-Bre1p-Lge1p mediated ubiquitination regulates transcriptional activation, meiotic DSB formation and H3 methylation<ref name='S000076743'>Yamashita K, et al. (2004) Rad6-Bre1-mediated histone H2B ubiquitylation modulates the formation of double-strand breaks during meiosis. Proc Natl Acad Sci U S A 101(31):11380-5 {{SGDpaper|S000076743}} PMID 15280549</ref><ref name='S000075526'>Kao CF, et al. (2004) Rad6 plays a role in transcriptional activation through ubiquitylation of histone H2B. Genes Dev 18(2):184-95 {{SGDpaper|S000075526}} PMID 14752010</ref><ref name='S000072664'>Hwang WW, et al. (2003) A conserved RING finger protein required for histone H2B monoubiquitination and cell size control. Mol Cell 11(1):261-6 {{SGDpaper|S000072664}} PMID 12535538</ref><ref name='S000070336'>Briggs SD, et al. (2002) Gene silencing: trans-histone regulatory pathway in chromatin. Nature 418(6897):498 {{SGDpaper|S000070336}} PMID 12152067</ref><ref name='S000070308'>Dover J, et al. (2002) Methylation of histone H3 by COMPASS requires ubiquitination of histone H2B by Rad6. J Biol Chem 277(32):28368-71 {{SGDpaper|S000070308}} PMID 12070136</ref><ref name='S000069711'>Martini EM, et al. (2002) A role for histone H2B during repair of UV-induced DNA damage in Saccharomyces cerevisiae. Genetics 160(4):1375-87 {{SGDpaper|S000069711}} PMID 11973294</ref><ref name='S000039551'>Robzyk K, et al. (2000) Rad6-dependent ubiquitination of histone H2B in yeast. Science 287(5452):501-4
+'''Description of YBL002W:''' Histone H2B, core histone protein required for chromatin assembly and chromosome function; nearly identical to HTB1; Rad6p-Bre1p-Lge1p mediated ubiquitination regulates transcriptional activation, meiotic DSB formation and H3 methylation<ref name='S000039551'>Robzyk K, et al. (2000) Rad6-dependent ubiquitination of histone H2B in yeast. Science 287(5452):501-4 {{SGDpaper|S000039551}} PMID 10642555</ref><ref name='S000075526'>Kao CF, et al. (2004) Rad6 plays a role in transcriptional activation through ubiquitylation of histone H2B. Genes Dev 18(2):184-95 {{SGDpaper|S000075526}} PMID 14752010</ref><ref name='S000076743'>Yamashita K, et al. (2004) Rad6-Bre1-mediated histone H2B ubiquitylation modulates the formation of double-strand breaks during meiosis. Proc Natl Acad Sci U S A 101(31):11380-5 {{SGDpaper|S000076743}} PMID 15280549</ref><ref name='S000070308'>Dover J, et al. (2002) Methylation of histone H3 by COMPASS requires ubiquitination of histone H2B by Rad6. J Biol Chem 277(32):28368-71 {{SGDpaper|S000070308}} PMID 12070136</ref><ref name='S000070336'>Briggs SD, et al. (2002) Gene silencing: trans-histone regulatory pathway in chromatin. Nature 418(6897):498 {{SGDpaper|S000070336}} PMID 12152067</ref><ref name='S000069711'>Martini EM, et al. (2002) A role for histone H2B during repair of UV-induced DNA damage in Saccharomyces cerevisiae. Genetics 160(4):1375-87 {{SGDpaper|S000069711}} PMID 11973294</ref><ref name='S000072664'>Hwang WW, et al. (2003) A conserved RING finger protein required for histone H2B monoubiquitination and cell size control. Mol Cell 11(1):261-6
-  {{SGDpaper|S000039551}} PMID 10642555</ref>
+  {{SGDpaper|S000072664}} PMID 12535538</ref>
 <br>
 <br>

@@ Line 18: / Line 18: @@
 |}
 <br>
-'''Description of YBL002W:''' Histone H2B, core histone protein required for chromatin assembly and chromosome function; nearly identical to HTB1; Rad6p-Bre1p-Lge1p mediated ubiquitination regulates transcriptional activation, meiotic DSB formation and H3 methylation<ref name='S000039551'>Robzyk K, et al. (2000) Rad6-dependent ubiquitination of histone H2B in yeast. Science 287(5452):501-4 {{SGDpaper|S000039551}} PMID 10642555</ref><ref name='S000069711'>Martini EM, et al. (2002) A role for histone H2B during repair of UV-induced DNA damage in Saccharomyces cerevisiae. Genetics 160(4):1375-87 {{SGDpaper|S000069711}} PMID 11973294</ref><ref name='S000070308'>Dover J, et al. (2002) Methylation of histone H3 by COMPASS requires ubiquitination of histone H2B by Rad6. J Biol Chem 277(32):28368-71 {{SGDpaper|S000070308}} PMID 12070136</ref><ref name='S000070336'>Briggs SD, et al. (2002) Gene silencing: trans-histone regulatory pathway in chromatin. Nature 418(6897):498 {{SGDpaper|S000070336}} PMID 12152067</ref><ref name='S000072664'>Hwang WW, et al. (2003) A conserved RING finger protein required for histone H2B monoubiquitination and cell size control. Mol Cell 11(1):261-6 {{SGDpaper|S000072664}} PMID 12535538</ref><ref name='S000075526'>Kao CF, et al. (2004) Rad6 plays a role in transcriptional activation through ubiquitylation of histone H2B. Genes Dev 18(2):184-95 {{SGDpaper|S000075526}} PMID 14752010</ref><ref name='S000076743'>Yamashita K, et al. (2004) Rad6-Bre1-mediated histone H2B ubiquitylation modulates the formation of double-strand breaks during meiosis. Proc Natl Acad Sci U S A 101(31):11380-5
+'''Description of YBL002W:''' Histone H2B, core histone protein required for chromatin assembly and chromosome function; nearly identical to HTB1; Rad6p-Bre1p-Lge1p mediated ubiquitination regulates transcriptional activation, meiotic DSB formation and H3 methylation<ref name='S000076743'>Yamashita K, et al. (2004) Rad6-Bre1-mediated histone H2B ubiquitylation modulates the formation of double-strand breaks during meiosis. Proc Natl Acad Sci U S A 101(31):11380-5 {{SGDpaper|S000076743}} PMID 15280549</ref><ref name='S000075526'>Kao CF, et al. (2004) Rad6 plays a role in transcriptional activation through ubiquitylation of histone H2B. Genes Dev 18(2):184-95 {{SGDpaper|S000075526}} PMID 14752010</ref><ref name='S000072664'>Hwang WW, et al. (2003) A conserved RING finger protein required for histone H2B monoubiquitination and cell size control. Mol Cell 11(1):261-6 {{SGDpaper|S000072664}} PMID 12535538</ref><ref name='S000070336'>Briggs SD, et al. (2002) Gene silencing: trans-histone regulatory pathway in chromatin. Nature 418(6897):498 {{SGDpaper|S000070336}} PMID 12152067</ref><ref name='S000070308'>Dover J, et al. (2002) Methylation of histone H3 by COMPASS requires ubiquitination of histone H2B by Rad6. J Biol Chem 277(32):28368-71 {{SGDpaper|S000070308}} PMID 12070136</ref><ref name='S000069711'>Martini EM, et al. (2002) A role for histone H2B during repair of UV-induced DNA damage in Saccharomyces cerevisiae. Genetics 160(4):1375-87 {{SGDpaper|S000069711}} PMID 11973294</ref><ref name='S000039551'>Robzyk K, et al. (2000) Rad6-dependent ubiquitination of histone H2B in yeast. Science 287(5452):501-4
-  {{SGDpaper|S000076743}} PMID 15280549</ref>
+  {{SGDpaper|S000039551}} PMID 10642555</ref>
 <br>
 <br>

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		+	<!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation -->
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		+	Specifically higher expression in carbon limited chemostat cultures versus carbon excess.
		+	<ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur.
		+	J Biol Chem 278(5):3265-74</ref>
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