Strains - Revision history

Stacia at 19:26, 16 November 2023

2023-11-16T19:26:18Z

Stacia at 19:25, 16 November 2023

2023-11-16T19:25:54Z

Stacia: /* Stock Centers */

2023-11-16T18:45:34Z

‎Stock Centers

Stacia at 18:08, 16 November 2023

2023-11-16T18:08:07Z

Suzia: /* Strain Collections */

2023-06-30T19:41:21Z

‎Strain Collections

Suzia: /* Strain Collections */

2023-06-30T19:36:58Z

‎Strain Collections

Edith at 17:00, 10 October 2022

2022-10-10T17:00:55Z

Stacia: /* Strain Backgrounds */

2021-11-04T21:20:49Z

‎Strain Backgrounds

Nash: /* Stock Centers */

2021-04-14T17:17:04Z

‎Stock Centers

Edith: /* Stock Centers */

2017-05-05T17:27:04Z

‎Stock Centers

← Older revision		Revision as of 19:26, 16 November 2023
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−	Do you have comments or results or other observations to share about any of the various yeast strain collections? Post them on the [https://community.alliancegenome.org/c/model-organism-yeast/strain-collections/242 Community Forum]!	+	Do you have comments or results or other observations to share about any of the various yeast strain collections?
		+	*Post them on the [https://community.alliancegenome.org/c/model-organism-yeast/strain-collections/242 Community Forum]!

	=Strain Backgrounds=		=Strain Backgrounds=

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 =Strain Backgrounds=
 *View genotypes and descriptions of [[Commonly_used_strains|commonly used strains]].
 *Table of [[Commonly_used_auxotrophic_markers|commonly used auxotrophic markers]], with sequence information where known.

← Older revision		Revision as of 18:45, 16 November 2023
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	*[http://yeast.lab.nig.ac.jp/yeast/ Yeast Genetic Resource Center (YGRC)] maintains over 4,800 S. pombe strains and over 9,000 S. cerevisiae strains.		*[http://yeast.lab.nig.ac.jp/yeast/ Yeast Genetic Resource Center (YGRC)] maintains over 4,800 S. pombe strains and over 9,000 S. cerevisiae strains.

−	*[http://www.dbvpg.unipg.it/ Industrial Yeasts Collection DBVPG]. The Industrial Yeasts Collection DBVPG, an academic biological resource centre (BRC) specialized in yeasts and yeast-like microorganisms, distributes strains and offers services to the international scientific community and to other private Institutions. DBVPG maintains over 6,000 yeast strains and over 300 yeast-like (Prototheca sp. ) strains.	+	*[http://www.dbvpg.unipg.it/ Industrial Yeasts Collection DBVPG]. The Industrial Yeasts Collection DBVPG, an academic biological resource centre (BRC) specialized in yeasts and yeast-like microorganisms, distributes strains and offers services to the international scientific community and to other private Institutions. DBVPG maintains over 6,000 yeast strains and over 300 yeast-like (Prototheca sp.) strains.

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 <!--*View [http://gbrowse.princeton.edu/cgi-bin/gbrowse/yeast_strains_snps/ SNPs] in <i>S. cerevisiae</i> strains-->
 *Table of [[Commonly_used_auxotrophic_markers|commonly used auxotrophic markers]], with sequence information where known.
 =Stock Centers=
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 *[http://www.dbvpg.unipg.it/ Industrial Yeasts Collection DBVPG]. The Industrial Yeasts Collection DBVPG, an academic biological resource centre (BRC) specialized in yeasts and yeast-like microorganisms, distributes strains and offers services to the international scientific community and to other private Institutions. DBVPG maintains over 6,000 yeast strains and over 300  yeast-like (Prototheca sp. ) strains.

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 *[https://www.thermofisher.com/us/en/home/references/protocols/proteins-expression-isolation-and-analysis/gfp-protocol/yeast-gfp-clone-collection.html Yeast-GFP Clone Collection] from Dr. Erin O'Shea and Dr. Jonathan Weissman at UCSF, consisting of C-terminal tagged open reading frames (ORFs).  These may be available from the [https://mayaschuldiner.wixsite.com/schuldinerlab/swat Schuldiner Lab SWAT].
-*[http://sites.utoronto.ca/andrewslab/data.shtml Yeast GST-Tagged Collection] for inducible overexpression of yeast ORFs, developed in the Andrews lab at the University of Toronto.  These may be available from [https://horizondiscovery.com/en/non-mammalian-research-tools/products/yeast-gst-tagged-orfs Horizon].
+*[https://horizondiscovery.com/en/non-mammalian-research-tools/products/yeast-gst-tagged-orfs Yeast GST-Tagged Collection] for inducible overexpression of yeast ORFs, developed in the [http://sites.utoronto.ca/andrewslab/data.shtml  Andrews lab at the University of Toronto].  Hosted by [https://horizondiscovery.com/en Horizon].
 *[http://yeastdeletion-sgtc.yeastgenome.org/downloads.html#strainsavail Yeast Knockout (YKO) Collection] from the [http://yeastdeletion-sgtc.yeastgenome.org/consortium.html <i>Saccharomyces</i> Genome Deletion Consortium].
-*[https://horizondiscovery.com/en/non-mammalian-research-tools/products/yeast-tap-tagged-orfs Yeast-TAP Fusion Library] from Dr. Erin O'Shea and Dr. Jonathan Weissman at UCSF, containing open reading frames (ORFs) tagged with a high-affinity epitope and expressed from their natural chromosomal locations.
+*[https://horizondiscovery.com/en/non-mammalian-research-tools/products/yeast-tap-tagged-orfs Yeast-TAP Fusion Library] from Dr. Erin O'Shea and Dr. Jonathan Weissman at UCSF, containing open reading frames (ORFs) tagged with a high-affinity epitope and expressed from their natural chromosomal locations.  Hosted by [https://horizondiscovery.com/en Horizon].
-*[http://www.openbiosystems.com/GeneExpression/Yeast/Tet-Promoters/ Yeast Tet-promoters Hughes Collection] containing 800 essential yeast genes for which expression is regulated by doxycycline. Hosted by [http://www.openbiosystems.com Open Biosystems].
+*[https://horizondiscovery.com/en/non-mammalian-research-tools/products/yeast-tet-promoters-hughes-ythc Yeast Tet-promoters Hughes Collection] containing 800 essential yeast genes for which expression is regulated by doxycycline. Hosted by [https://horizondiscovery.com/en Horizon].
 *The Yeast Transposon Insertion Library Collection, derived by using mini-transposons (mTns) to mutagenize a yeast genomic DNA library, is available from the [http://snyderlab.stanford.edu/ Mike Snyder lab] at Stanford University. Please contact Minyi Shi (minyishi at stanford dot edu) with requests.

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 *[http://www.thermoscientificbio.com/non-mammalian-cdna-and-orf/yeast-gst-tagged-orfs/ Yeast GST-Tagged Collection] for inducible overexpression of yeast ORFs, developed in the Andrews lab at the University of Toronto.  Hosted by [http://www.thermoscientificbio.com/openbiosystems/?redirect=true Open Biosystems].
-*[http://www-sequence.stanford.edu/group/yeast_deletion_project/deletions3.html Yeast Knockout (YKO) Collection] from the [http://www-sequence.stanford.edu/group/yeast_deletion_project/member.html <i>Saccharomyces</i> Genome Deletion Consortium].
+*[http://yeastdeletion-sgtc.yeastgenome.org/downloads.html#strainsavail Yeast Knockout (YKO) Collection] from the [http://yeastdeletion-sgtc.yeastgenome.org/consortium.html <i>Saccharomyces</i> Genome Deletion Consortium].
 *[http://www.thermoscientificbio.com/non-mammalian-cdna-and-orf/yeast-tap-tagged-orfs/ Yeast-TAP Fusion Library] from Dr. Erin O'Shea and Dr. Jonathan Weissman at UCSF, containing open reading frames (ORFs) tagged with a high-affinity epitope and expressed from their natural chromosomal locations. Hosted by [http://www.thermoscientificbio.com/openbiosystems/?redirect=true Open Biosystems].

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 *[http://www.atcc.org/ American Type Culture Collection] (ATCC) maintains yeast stocks and clones.
-*[http://web.uni-frankfurt.de/fb15/mikro/euroscarf/ EUROSCARF], the EUROpean Saccharomyces Cerevisiae ARchive for Functional analysis, maintains a collection of systematic deletion strains [http://cgi.server.uni-frankfurt.de/fb15/rose/index.html searchable] by gene name.
+*[http://www.euroscarf.de EUROSCARF], the EUROpean Saccharomyces Cerevisiae ARchive for Functional analysis, maintains a collection of systematic deletion strains [http://cgi.server.uni-frankfurt.de/fb15/rose/index.html searchable] by gene name.
 *[http://www.ncyc.co.uk/ National Collection of Yeast Cultures (NCYC)] maintains over 3,100 non-pathogenic yeasts, including type strains, strains of general interest for education and research, strains of industrial importance, and genetically marked strains.

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 *[http://www.addgene.org Addgene] is a non-profit plasmid repository that distributes many plasmids for yeast research.  In particular, Addgene is distributing a collection of [http://www.addgene.org/yeast_gateway Yeast Advanced Gateway Destination Vectors] created by Dr. Susan Lindquist's laboratory.
-*[http://yeast.lab.nig.ac.jp/nig/index_en.html Yeast Genetic Resource Center (YGRC)] maintains over 4,800 S. pombe strains and over 9,000 S. cerevisiae strains.
+*[http://yeast.lab.nig.ac.jp/yeast/ Yeast Genetic Resource Center (YGRC)] maintains over 4,800 S. pombe strains and over 9,000 S. cerevisiae strains.
 *[http://www.dbvpg.unipg.it/ Industrial Yeasts Collection DBVPG]. The Industrial Yeasts Collection DBVPG, an academic biological resource centre (BRC) specialized in yeasts and yeast-like microorganisms, distributes strains and offers services to the international scientific community and to other private Institutions. DBVPG maintains over 6,000 yeast strains and over 300  yeast-like (Prototheca sp. ) strains.