SGD Newsletter, Spring 2019 - Revision history

Suzia: /* JBrowse: S288C Transcriptome and New Data Tracks */

2019-05-31T20:45:08Z

‎JBrowse: S288C Transcriptome and New Data Tracks

Suzia: /* 25th Anniversary of the SGD Website */

2019-05-31T20:45:00Z

‎25th Anniversary of the SGD Website

Suzia at 20:44, 31 May 2019

2019-05-31T20:44:45Z

Suzia: /* What else have we been up to lately? */

2019-05-31T17:08:18Z

‎What else have we been up to lately?

Suzia: /* What else have we been up to lately? */

2019-05-16T23:28:34Z

‎What else have we been up to lately?

Suzia: /* What else have we been up to lately? */

2019-05-16T23:19:26Z

‎What else have we been up to lately?

Suzia: /* SGD Biocurators Out and About */

2019-05-16T23:19:03Z

‎SGD Biocurators Out and About

Suzia: /* SGD Biocurators Out and About */

2019-05-16T23:18:35Z

‎SGD Biocurators Out and About

Suzia: /* 25th Anniversary of the SGD Website */

2019-05-16T23:17:28Z

‎25th Anniversary of the SGD Website

Edith: /* SGD at Biocuration 2019 */

2019-05-16T22:56:08Z

‎SGD at Biocuration 2019

← Older revision		Revision as of 20:45, 31 May 2019
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	SGD has also updated our JBrowse with an [https://www.yeastgenome.org/blog/new-data-tracks-added-to-jbrowse additional 157 new data tracks] related to genome-wide experiments and omics data for you to explore. The categories added include: Transcription & Transcriptional Regulation; Histone Modification; Chromatin Organization; RNA Catabolism; Transposons; DNA Replication, Recombination, and Repair.		SGD has also updated our JBrowse with an [https://www.yeastgenome.org/blog/new-data-tracks-added-to-jbrowse additional 157 new data tracks] related to genome-wide experiments and omics data for you to explore. The categories added include: Transcription & Transcriptional Regulation; Histone Modification; Chromatin Organization; RNA Catabolism; Transposons; DNA Replication, Recombination, and Repair.
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	==Proteome-wide Abundance Data==		==Proteome-wide Abundance Data==

← Older revision		Revision as of 20:45, 31 May 2019
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	SGD staff celebrated the day by taking a tour around the Stanford campus and enjoying the beautiful California spring weather. Did you catch our [https://wiki.yeastgenome.org/images/f/f8/cdc6.png throwback page for CDC6]?		SGD staff celebrated the day by taking a tour around the Stanford campus and enjoying the beautiful California spring weather. Did you catch our [https://wiki.yeastgenome.org/images/f/f8/cdc6.png throwback page for CDC6]?
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 ==25th Anniversary of the SGD Website==
 [[File:sgddish.jpg|link=https://wiki.yeastgenome.org/images/1/14/sgddish.jpg|thumb|left|upright=.8|SGD members in front of the 150-foot-diameter Stanford Dish.]]
-Wednesday, May 8th, marked the 25th year that the SGD website has been live.  Although we celebrated the 25th anniversary of the database last year, the actual website wasn't online until the following year (when the "World Wide Web" had only been in existence for about 22 months).  Starting in 1994, you could simply access ''<nowiki>http://genome-www.stanford.edu/cgi-bin/nph-acedb/acedb/SacchDB</nowiki>'' to find information on your favorite model organism.
+Wednesday, May 8th, marked the 25th year that the SGD website has been live.  Although we celebrated the 25th anniversary of the database last year, the actual website wasn't online until the following year (when the "World Wide Web" had only been in existence for about 22 months).  Starting in 1994, you could simply access SacchDB from our old server genome-www.stanford.edu to find information on your favorite model organism.
 We'd like to express our gratitude to all of our users, collaborators, advisors, staff, and anyone else who has supported SGD over the last 25 years.  Without such a great community behind us, SGD would not be the fantastic resource it is today.

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 <br><br>
-==What else have we been up to lately? ==
+==What Else Have We Been Up To Lately? ==
 [[File:SGDatFungalGenetics.jpg|link=https://www.flickr.com/photos/166398398@N03/40536794073/in/album-72157679637710688/|thumb|upright=.8|Kevin MacPherson telling the SGD classic about 'why did the yeast cross the road?' at the Fungal Genetics Conference.[Photo by Matt Sachs, GSA]]]

@@ Line 91: / Line 91: @@
 ==What else have we been up to lately? ==
-[[File:SGDatFungalGenetics.jpg|link=https://wiki.yeastgenome.org/images/f/f3/SGDatFungalGenetics.jpg|thumb|upright=.8|Kevin MacPherson telling the SGD classic about 'why did the yeast cross the road?' at the Fungal Genetics Conference.]]
+[[File:SGDatFungalGenetics.jpg|link=https://www.flickr.com/photos/166398398@N03/40536794073/in/album-72157679637710688/|thumb|upright=.8|Kevin MacPherson telling the SGD classic about 'why did the yeast cross the road?' at the Fungal Genetics Conference.[Photo by Matt Sachs, GSA]]]
 * Biocuration Scientist Kevin MacPherson gave tutorials at the [https://coursesandconferences.wellcomegenomecampus.org/our-events/fungal-pathogen-genomics-2019/ Fungal Pathogen Genomics course] at the [https://www.wellcomegenomecampus.org Wellcome Genome Campus] in May. He taught students how to use tools and resources at both SGD and the [http://www.candidagenome.org/ ''Candida'' Genome Database].

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 *Senior Biocuration Scientist Rob Nash will be conducting a workshop at the annual [https://meetings.cshl.edu/courses.aspx?course=C-YEAS&year=19 Yeast Genetics & Genomics] course at Cold Spring Harbor Laboratory July 23 - August 12, 2019.<br><br><br>
-[[File:SuperYeast.jpg|thumb|left|upright=.50]]
+[[File:SuperYeast.jpg|link=https://wiki.yeastgenome.org/images/b/b8/SuperYeast.jpg|thumb|left|upright=.50]]
 <br><br><br>
 *SGD will be attending [https://yeast2019.org/ ICYGMB2019], the 29th International Conference on Yeast Genetics and Molecular Biology in Göteborg, Sweden August 18-22, 2019. If you're going, be sure to attend the SGD Workshop on the afternoon of Day 4, Wednesday August 21!

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 ==SGD Biocurators Out and About==
 You might see some of our SGD members at these upcoming events:
-[[File:RN.jpg|thumb|left|upright=.50]] <br><br><br>
+[[File:RN.jpg|thumb|link=https://wiki.yeastgenome.org/images/3/33/RN.jpg|left|upright=.50]] <br><br><br>
 *Senior Biocuration Scientist Rob Nash will be conducting a workshop at the annual [https://meetings.cshl.edu/courses.aspx?course=C-YEAS&year=19 Yeast Genetics & Genomics] course at Cold Spring Harbor Laboratory July 23 - August 12, 2019.<br><br><br>

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 ==SGD at Biocuration 2019==
-From April 7th-10th, PI Mike Cherry, Principal Biocuration Scientist Stacia Engel, Senior Biocuration Scientist Edith Wong, Biocuration Scientist Suzi Aleksander and Software Developer Felix Gondwe attended the International Society for Biocuration's 12th International Biocuration Conference in Cambridge, UK. Several of our staff presented posters, while Edith gave a great talk on her recent ''Database'' publication: [https://www.ncbi.nlm.nih.gov/pubmed/?term=30715277 Integration of Macromolecular Complex Data into the ''Saccharomyces'' Genome Database].  Below are the posters and the talk SGD staff presented at Biocuration 2019. Click on any of the links to download the presentation.
+From April 7th-10th, PI Mike Cherry, Principal Biocuration Scientist Stacia Engel, Senior Biocuration Scientist Edith Wong, Biocuration Scientist Suzi Aleksander and Software Developer Felix Gondwe attended the International Society for Biocuration's 12th International Biocuration Conference in Cambridge, UK. Several of our staff presented posters, while Edith also gave a great talk on her recent ''Database'' publication: [https://www.ncbi.nlm.nih.gov/pubmed/?term=30715277 Integration of Macromolecular Complex Data into the ''Saccharomyces'' Genome Database].  Below are the posters and the talk SGD staff presented at Biocuration 2019. Click on any of the links to download the presentation.
 ===Presentation===
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