https://wiki.yeastgenome.org/api.php?action=feedcontributions&feedformat=atom&user=Shuai 2026-06-15T19:24:20Z User contributions MediaWiki 1.31.14 https://wiki.yeastgenome.org/index.php?title=File:ORFmap-chr1.html&diff=401126 2019-06-13T03:05:28Z

<p>Shuai: Created page with &quot;&lt;html&gt; &lt;a name=&quot;map&quot;&gt;&lt;center&gt;&lt;h2 class=&quot;header-margin&quot;&gt;Chromosome I features that span coordinates 1 - 230218 bp&lt;/h2&gt;&lt;/center&gt;&lt;map name=&quot;orfmapImage&quot;&gt;&lt;area shape=&quot;rect&quot; coord...&quot;</p> <hr /> <div>&lt;html&gt;<br /> <br /> &lt;a name=&quot;map&quot;&gt;&lt;center&gt;&lt;h2 class=&quot;header-margin&quot;&gt;Chromosome I features that span coordinates 1 - 230218 bp&lt;/h2&gt;&lt;/center&gt;&lt;map name=&quot;orfmapImage&quot;&gt;&lt;area shape=&quot;rect&quot; coords=&quot;336,905,346,915&quot; href=&quot;https://www.yeastgenome.org/locus/CEN1&quot;&gt;&lt;area shape=&quot;RECT&quot; coords=&quot;30,177,51,181&quot; href=&quot;https://www.yeastgenome.org/locus/TEL01L&quot; title=&quot;&quot; alt=&quot;map&quot; target=&quot;_blank&quot;&gt;<br /> &lt;area shape=&quot;RECT&quot; coords=&quot;30,187,66,195&quot; href=&quot;https://www.yeastgenome.org/locus/TEL01L&quot; 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target=&quot;_blank&quot;&gt;<br /> &lt;area shape=&quot;RECT&quot; coords=&quot;50,889,92,897&quot; href=&quot;https://www.yeastgenome.org/locus/YAL004W&quot; title=&quot;&quot; alt=&quot;map&quot; class=&quot;popup&quot;&gt;<br /> &lt;area shape=&quot;RECT&quot; coords=&quot;88,904,115,908&quot; href=&quot;https://www.yeastgenome.org/locus/YAL003W&quot; title=&quot;&quot; alt=&quot;map&quot; target=&quot;_blank&quot;&gt;<br /> &lt;area shape=&quot;RECT&quot; coords=&quot;90,904,100,908&quot; href=&quot;https://www.yeastgenome.org/locus/YAL003W&quot; title=&quot;&quot; alt=&quot;map&quot; target=&quot;_blank&quot;&gt;<br /> &lt;area shape=&quot;RECT&quot; coords=&quot;88,880,112,888&quot; href=&quot;https://www.yeastgenome.org/locus/YAL003W&quot; title=&quot;&quot; alt=&quot;map&quot; class=&quot;popup&quot;&gt;<br /> &lt;area shape=&quot;RECT&quot; coords=&quot;93,902,96,906&quot; href=&quot;https://www.yeastgenome.org/locus/snR18&quot; title=&quot;&quot; alt=&quot;map&quot; target=&quot;_blank&quot;&gt;<br /> &lt;area shape=&quot;RECT&quot; coords=&quot;93,889,123,897&quot; href=&quot;https://www.yeastgenome.org/locus/snR18&quot; title=&quot;&quot; alt=&quot;map&quot; class=&quot;popup&quot;&gt;<br /> &lt;area shape=&quot;RECT&quot; coords=&quot;130,904,233,908&quot; href=&quot;https://www.yeastgenome.org/locus/YAL002W&quot; title=&quot;&quot; alt=&quot;map&quot; target=&quot;_blank&quot;&gt;<br /> &lt;area shape=&quot;RECT&quot; coords=&quot;130,889,154,897&quot; href=&quot;https://www.yeastgenome.org/locus/YAL002W&quot; title=&quot;&quot; alt=&quot;map&quot; class=&quot;popup&quot;&gt;<br /> &lt;area shape=&quot;RECT&quot; coords=&quot;229,908,238,912&quot; href=&quot;https://www.yeastgenome.org/locus/ARS108&quot; title=&quot;&quot; alt=&quot;map&quot; target=&quot;_blank&quot;&gt;<br /> &lt;area shape=&quot;RECT&quot; coords=&quot;229,922,265,930&quot; href=&quot;https://www.yeastgenome.org/locus/ARS108&quot; title=&quot;&quot; alt=&quot;map&quot; class=&quot;popup&quot;&gt;<br /> &lt;area shape=&quot;RECT&quot; coords=&quot;235,912,331,916&quot; 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src=&quot;./orfmap.12401.png&quot;&gt;&lt;/center&gt;&lt;p&gt;&lt;map name=&quot;keyImage&quot;&gt;&lt;area shape=&quot;RECT&quot; coords=&quot;391,245,524,260&quot; href=&quot;https://www.yeastgenome.org/help/glossary.html&quot;&gt;<br /> <br /> &lt;/html&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:LocationImageThumb&diff=353487 2012-01-24T17:40:14Z

<p>Shuai: </p> <hr /> <div>{|{{Prettytable}}<br /> |-<br /> !SGD ORF map||GBrowse<br /> |-valign=&quot;top&quot;<br /> |http://www.yeastgenome.org/cgi-bin/ORFMAP/miniORFmap?dbid={{{1}}}&amp;.png<br /> |http://www.yeastgenome.org/cgi-bin/gbrowse_img/scgenome-minimap/?abs=1;options=Everything%200;width=85;name=ChrXVI:78711..83356&amp;.png<br /> |}</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:SGDpaper&diff=353486 2012-01-24T17:38:58Z

<p>Shuai: </p> <hr /> <div>[http://www.yeastgenome.org/cgi-bin/reference/reference.pl?dbid={{{1}}} SGD]</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:LocusStub&diff=344415 2012-01-23T22:37:37Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> &lt;protect&gt;<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid={{{DBID}}} {{{FEATURE_NAME}}}] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''{{{GENE_NAME}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''{{{ALIASES}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || {{{FEATURE_TYPE}}}<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| {{{LOCATION}}}<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Primary SGDID''' || {{{DBID}}}<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{{FEATURE_NAME}}}:''' {{{HEADLINE}}}{{{REFS}}}<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;/protect&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> {{{COMMUNITY ANNOTATIONS}}}<br /> &lt;protect&gt;<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}<br /> &lt;/protect&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=YGR156W&diff=137113 2009-02-26T22:20:19Z

<p>Shuai: /* Community Commentary */</p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> &lt;protect&gt;<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000003388 YGR156W] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''PTI1 ''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||'' ''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || ORF, Verified[[Category:ORF]][[Category:ORF, Verified]]<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| Chr VII:800551..801828<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Primary SGDID''' || S000003388<br /> |}<br /> &lt;br&gt;<br /> '''Description of YGR156W:''' Pta1p Interacting protein&lt;ref name='S000060296'&gt;Hubner, W. and Keller, W. (2001) PTI1 encodes a yeast homologue of the mammalian CstF-64 kDa protein associated with the cleavage and polyadenylation complex ():<br /> {{SGDpaper|S000060296}} PMID &lt;/ref&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;/protect&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> PTI1 is an essential gene involved in the coupling of Pol II transcription to pre-mRNA 3' processing (cleavage and polyadenylation). It was first described genetically as a supressor of cold sensitivity resulting from deletion of CTK1 (CTK1 encodes the catalytic subunit of CTDK-I, which hyperphosphorylates the CTD of the largest subunit of Pol II). Temperature sensitive mutations of PTI1 are synthetically lethal with CTK1 deletions , and with a t.s. allele of RNA14, a component of cleavage factor IA, which cleaves pre-mRNA prior to 3' polyadenylation. CF IA is the apparent yeast homolog to mammalian CstF, with Rna14p showing sequence similarity to CstF-77. Both Rna15p (a known component of CF IA) and Pti1p have sequence similarities to CstF-64. Combining t.s. alleles of PTI1 and RNA15 shows slight growth defects, but no lethality.<br /> <br /> A known example of PTI1 and 3' pre-mRNA processing is the aberrant 3' cleavage of NCE102 in a strain with a t.s. allele of PTI1. In this strain, 3' cleavage occurs at multiple sites - two sites that are used in wild type strains, and at least one downstream site (160-180nt past the usual cleavage site) that is not detectably used in wild type strains. The CTK1 knockout strain shows a similar effect on 3' cleavage site usage for the NCE102 transcript.<br /> <br /> Pti1p binds both Rna14p and Pta1p, the yeast homologs of mammalian CstF-77 and symplekin, which both bind CstF-64 (for which RNA15 and PTI1 are likely homologs). PTI1 also binds Pcf11p, a component of yeast CF IA that binds Rna15p. Pti1p binding to these proteins is almost entirely by a central region with homology to the &quot;hinge&quot; region of CstF-64 that is responsible for most of CstF-64's protein-protein interactions.<br /> <br /> The genetic interactions of CTK1 and PTI1, and the similar effects of ctk1 and pti1 t.s. on NCE102 processing indicate that the phospho-CTD generated by CTDK-I is involved in bringing 3' cleavage factors to their targets, and that a complex containing Pti1p is thus recruited.<br /> <br /> It has been hypothesized that given these properties of PTI1 and Pti1p, that it is a component of an alternate form of CF IA, substituting for Rna15p. Given the similarities of their bindings, and the non-lethality when t.s. alleles of PTI1 and RNA15 are combined, it is unlikely that Rna15p and Pti1p coexist in the same complex. Given the poor conservation of yeast 3' processing signal sequences, this hypothesis proposes that alternate forms of CF IA exist to recognize different 3' cleavage-polyadenylation signals. <br /> <br /> <br /> &lt;!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation --&gt;<br /> &lt;!--<br /> Specifically higher expression in carbon limited chemostat cultures versus carbon excess.<br /> &lt;ref&gt;Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. <br /> J Biol Chem 278(5):3265-74&lt;/ref&gt;<br /> --&gt;<br /> <br /> <br /> <br /> &lt;protect&gt;<br /> <br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}<br /> &lt;/protect&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=YFL039C&diff=137034 2009-02-26T18:12:54Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> &lt;protect&gt;<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000001855 YFL039C] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''ACT1 ''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''ABY1, END7''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || ORF, Verified[[Category:ORF]][[Category:ORF, Verified]]<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| Chr VI:54695..53260<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Primary SGDID''' || S000001855<br /> |}<br /> &lt;br&gt;<br /> '''Description of YFL039C:''' Actin, structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions.&lt;ref name='S000041005'&gt;Pruyne D and Bretscher A (2000) Polarization of cell growth in yeast. J Cell Sci 113 ( Pt 4):571-85<br /> {{SGDpaper|S000041005}} PMID 10652251&lt;/ref&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;/protect&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> <br /> <br /> <br /> <br /> &lt;!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation --&gt;<br /> &lt;!--<br /> Specifically higher expression in carbon limited chemostat cultures versus carbon excess.<br /> &lt;ref&gt;Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. <br /> J Biol Chem 278(5):3265-74&lt;/ref&gt;<br /> --&gt;<br /> <br /> <br /> <br /> &lt;protect&gt;<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}<br /> &lt;/protect&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=CommunityW303.html&diff=72653 2007-05-10T23:25:45Z

<p>Shuai: New page: == Information regarding the provenance of ''Saccharomyces cerevisiae'' strain W303 == ''Kindly provided at SGD's request by Rodney Rothstein on March 10, 2005.'' The original W303 strai...</p> <hr /> <div>== Information regarding the provenance of ''Saccharomyces cerevisiae'' strain W303 ==<br /> <br /> ''Kindly provided at SGD's request by Rodney Rothstein on March 10, 2005.''<br /> <br /> The original W303 strain is mutated in ''rad5-535'' (an G to R change at position 535 - See Fan et al. Genetics 142:749, 1996).<br /> <br /> * The change is subtle resulting in a phenotype in combination with ''soh1'' (Hannah Klein in the Fan paper), sir mutations--increased mms resistance (David Sinclair, unpublished) and no effect on recombination, UV or X-ray sensitivities (Rothstein lab, unpublished).<br /> * To assay for its presence in any W303 derivative strain, one can do a PCR and digest the products with MnlI, as the mutation creates a MnlI site.<br /> ** The primers to use are:<br /> *** 5'-gcagcaggaccatgtaaacg-3' RAD5-L<br /> *** 5'-aaactcgttactccactgcg-3' RAD5-R<br /> ** Run a 3% agarose gel to see the fragments.<br /> *** In wild type: 182 bp and 155 bp.<br /> *** In ''rad5-535''&lt;nowiki&gt;: 155 bp, 120 bp and 62 bp.&lt;/nowiki&gt;<br /> ** The RAD5 wild type derivatives of W303 are W1588.<br /> <br /> Some relevant information for W303:<br /> <br /> ''MAT''a/''MAT''alpha {''leu2-3,112 trp1-1 can1-100 ura3-1 ade2-1 his3-11,15''} [''phi+'']<br /> <br /> * This strain was made diploid by transforming W301-18A (Rothstein, Meth. Enzymol. 101:202-211, 1983.) with an ''HO''-containing plasmid.<br /> * The diploid was dissected to obtain the isogenic ''MAT''a (W303-1A) and ''MAT''alpha (W303-1B) strains (Thomas &amp;amp; Rothstein, Cell 56:619-630, 1989).<br /> * The {brackets} in the genotype indicate that these genes are homozygous in the diploid. Each haploid strain has only a single copy the gene.<br /> * The [''phi+''] element is a non-Mendelian trait that affects the efficiency of amber suppression. Unlike the related element [''psi+''], this element does not affect ochre suppression.<br /> ** ''ade2-1'' and ''can1-100'' are ochre-suppressible.<br /> ** ''trp1-1'' is amber-suppressible.<br /> ** ''ura3-1'' reverts at very low frequency (2 x 10e-9).<br /> ** Both ''leu2-3,112'' and ''his3-11,15'' do not revert at any measurable frequency.<br /> ** Sequence details for the relevant genes are listed in the table at the bottom of the page.<br /> <br /> Brief description of the history of W303:<br /> <br /> * Many crosses were made with strains from Rothstein's Ph.D. thesis, W87 derivatives<br /> ** see Genetics 85:35-54, 1977 and Genetics 85:55-64, 1977<br /> ** These are mainly but not exclusively X2180-like (S288C).<br /> * It also got part of its genetic background from Fred Sherman's strains, D311-3A<br /> ** see Genetics 94:871-889, 1980 and Genetics 94:891-898, 1980<br /> * Finally, one of the grandparents of W301-18A, D190-9C, is a real mutt, which Rothstein got from Jack Szostak and about which very little is known.<br /> <br /> TABLE. Mutant alleles in W303.<br /> <br /> {| border=&quot;1&quot; cellspacing=&quot;4&quot; cellpadding=&quot;2&quot;<br /> | allele<br /> | nt position<br /> | alteration<br /> | aa change<br /> |-<br /> | ''ura3-1''<br /> | 701<br /> | gga &amp;gt; gAa<br /> | Gly &amp;gt; Glu<br /> |-<br /> | ''trp1-1''&lt;nowiki&gt;***&lt;/nowiki&gt;<br /> | 247<br /> | gag &amp;gt; Tag<br /> | Glu &amp;gt; amber<br /> |-<br /> | ''can1-100''<br /> | 139<br /> | aaa &amp;gt; Taa<br /> | Lys &amp;gt; ochre<br /> |-<br /> | ''ade2-1''<br /> | 27**<br /> | taa &amp;gt; ttG<br /> | none<br /> |-<br /> |<br /> | 190<br /> | gaa &amp;gt; Taa<br /> | Glu &amp;gt; ochre<br /> |-<br /> |<br /> | 301*<br /> | aga &amp;gt; Gga<br /> | Arg &amp;gt; Gly<br /> |-<br /> |<br /> | 372**<br /> | gtt &amp;gt; gtC<br /> | none<br /> |-<br /> |<br /> | 1617**<br /> | acg &amp;gt; acA<br /> | none<br /> |-<br /> | ''his3-11,15''<br /> | 208<br /> | G deletion<br /> | -1 frameshift<br /> |-<br /> |<br /> | 319<br /> | G deletion<br /> | -1 frameshift<br /> |-<br /> | ''leu2-3,112''<br /> | 168**<br /> | gtc &amp;gt; gtT<br /> | none<br /> |-<br /> |<br /> | 206*<br /> | gtt &amp;gt; gCt<br /> | Val &amp;gt; Ala<br /> |-<br /> |<br /> | 249<br /> | G insertion<br /> | +1 frameshift<br /> |-<br /> |<br /> | 792<br /> | G insertion<br /> | +1 frameshift<br /> |-<br /> |<br /> | 897**<br /> | gtt &amp;gt; gtC<br /> | none<br /> |-<br /> |<br /> | 898*<br /> | gac &amp;gt; Aac<br /> | Asp &amp;gt; Asn<br /> |}<br /> <br /> * extra mutation compared to published wild-type sequence&lt;br /&gt; ** nucleotide change compared to published wild-type sequence, but amino acid is conserved&lt;br /&gt; ***info from John McDonald, formerly of the Rothstein lab, Genetics 147:1557-1568 (1997)</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Commonly_used_strains&diff=72652 2007-05-10T23:24:59Z

<p>Shuai: /* Strains described on this page */</p> <hr /> <div>= Commonly used ''S. cerevisiae'' strains =<br /> <br /> This table describes some of the most commonly used yeast lab strains. Much of the information is taken from [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://dbb.urmc.rochester.edu/labs/sherman_f/StartedYeast.html F. Sherman (2002)] Getting started with yeast, Methods Enzymol. 350, 3-41. Other useful papers for strain background information include<br /> <br /> * [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000050744 Mortimer and Johnston] (1986) Genetics 113:35-43 - thoroughly describes the genealogy of strain S288C<br /> * [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000079648 van Dijken et al.] (2000) Enzyme Microb Technol 26:706-714 - compares various characteristics of commonly used lab strains<br /> * [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000080159 Winzeler et al.] (2003) Genetics 163:79-89 - uses SFP (single-feature polymorphisms) analysis to study genetic identity between common lab strains<br /> <br /> Please send e-mail to the curators at SGD at [http://db.yeastgenome.org/cgi-bin/suggestion yeast-curator@genome.stanford.edu] if you have additions or modifications you would like to suggest.<br /> <br /> &lt;blockquote&gt;&lt;blockquote&gt;<br /> <br /> == Strains described on this page ==<br /> <br /> {|<br /> |<br /> * [http://wiki.yeastgenome.org/index.php/straintable#A364A A364A]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#AB972 AB972]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#BY4743 BY4743]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#CEN.PK2 CEN.PK/CEN.PK2]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#D273-10B D273-10B]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#DC5 DC5]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#FL100 FL100]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#FY1679 FY1679]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#S288C S288C]<br /> |<br /> * [http://wiki.yeastgenome.org/index.php/straintable#Sigma_1278B Sigma 1278B]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#SK1 SK1]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#W303 W303]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#X2180-1A X2180-1A]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#XJ24-24a XJ24-24a]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#YNN216 YNN216]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#YPH499 YPH499]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#YPH500 YPH500]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#YPH501 YPH501]<br /> |}<br /> <br /> &lt;/blockquote&gt;&lt;/blockquote&gt;<br /> <br /> {| border=&quot;3&quot;<br /> |- align=&quot;center&quot;<br /> ! width=&quot;5%&quot; | Strain<br /> ! width=&quot;30%&quot; | Genotype<br /> ! width=&quot;30%&quot; | Notes<br /> ! width=&quot;30%&quot; | References<br /> ! width=&quot;5%&quot; | ATCC/Open Biosystems/EUROSCARF<br /> |-<br /> |&lt;div id=S288C&gt;S288C<br /> | ''MAT''α ''SUC2 gal2 mal mel flo1 flo8-1 hap1''<br /> |<br /> Strain used in the systematic sequencing project, the sequence stored in SGD. S288C does not form pseudohyphae. In addition, since it has a mutated copy of [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000004246 ''HAP1''], it is not a good strain for mitochondrial studies. S288C strains are ''gal''2- and they do not use galactose anaerobically.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000050744 Mortimer and Johnston] (1986) Genetics 113:35-43.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.atcc.org/catalog/numSearch/numResults.cfm?atccNum=204508 ATCC: 204508]<br /> |-<br /> |&lt;div id=FY1679&gt;FY1679<br /> | ''MAT''a/α ''ura3-52/ura3-52 trp1''Δ''63/TRP1 leu2''Δ'' 1/LEU2 his3''Δ''200/HIS3 GAL2/GAL''<br /> | Isogenic to S288C; used in the systematic sequencing project, the sequence stored in SGD.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000047446 Winston et al.] (1995) Yeast 11:53-55.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://web.uni-frankfurt.de/fb15/mikro/euroscarf/data/fy1679.html EUROSCARF: 10000D]<br /> |-<br /> |&lt;div id=BY4743&gt;BY4743<br /> | ''MAT''a/α ''his3''Δ''1/his3''Δ''1 leu2''Δ''0/leu2''Δ''0 lys2''Δ''0/LYS2 MET15/met15''Δ''0 ura3''Δ''0/ura3''Δ''0''<br /> |<br /> Strain used in the [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www-sequence.stanford.edu/group/yeast_deletion_project/project_desc.html systematic deletion project], generated from a cross between BY4741 and BY4742, which are derived from S288C. See Brachmann et al. reference for details.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000041186 Brachmann et al.] (1998) Yeast 14:115-32.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.openbiosystems.com/ Open Biosystems: YSC1050]<br /> |-<br /> |&lt;div id=W303&gt;W303<br /> | ''MAT''a/''MAT''α {''leu2-3,112 trp1-1 can1-100 ura3-1 ade2-1 his3-11,15''} [''phi&lt;sup&gt;+&lt;/sup&gt;'']<br /> | W303 also contains a ''bud4'' mutation that causes haploids to bud with a mixture of axial and bipolar budding patterns. In addition, the original W303 strain contains the ''rad5-535'' allele.<br /> | W303 constructed by Rodney Rothstein (''see [http://wiki.yeastgenome.org/index.php/CommunityW303.html detailed notes] from RR'').&lt;br /&gt;''bud4'' info: Voth, W.P. et al. (2005) Eukaryotic Cell, in press. &lt;br /&gt;''rad5-535'' info: Fan et al. (1996) Genetics 142:749<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.openbiosystems.com/Genomics/Model Organism Resources/Yeast Resources/Yeast Knockout Strains/ Open Biosystems: YSC1058]<br /> |-<br /> |&lt;div id=W303-1A&gt;W303-1A<br /> | ''MAT''a {''leu2-3,112 trp1-1 can1-100 ura3-1 ade2-1 his3-11,15''}<br /> | W303-1A possesses a ''ybp1-1'' mutation (I7L, F328V, K343E, N571D) which abolishes Ybp1p function, increasing sensitivity to oxidative stress.<br /> |<br /> W303 constructed by Rodney Rothstein (''see [http://wiki.yeastgenome.org/index.php/CommunityW303.html detailed notes] from RR'').&lt;br /&gt;''ybp1-1'' info: [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000073844 Veal et al.] (2003) J. Biol. Chem. 278:30896-904.&lt;br /&gt;<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.openbiosystems.com/Genomics/Model Organism Resources/Yeast Resources/Yeast Knockout Strains/ Open Biosystems: YSC1058]<br /> |-<br /> |&lt;div id=W303-1B&gt;W303-1B<br /> | ''MAT''α {''leu2-3,112 trp1-1 can1-100 ura3-1 ade2-1 his3-11,15''}<br /> |<br /> | W303 constructed by Rodney Rothstein (''see [http://wiki.yeastgenome.org/index.php/CommunityW303.html detailed notes] from RR'').<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.openbiosystems.com/Genomics/Model Organism Resources/Yeast Resources/Yeast Knockout Strains/ Open Biosystems: YSC1058]<br /> |-<br /> |&lt;div id=X2180-1A&gt;X2180-1A<br /> | ''MAT''a'' SUC2 mal mel gal2 CUP1''<br /> |<br /> | Robert Mortimer, personal comm.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.atcc.org/catalog/numSearch/numResults.cfm?atccNum=204504 ATCC: 204504]<br /> |-<br /> |&lt;div id=AB972&gt;AB972<br /> | ''MAT''α'' X2180-1B trp1&lt;sub&gt;0&lt;/sub&gt; [rho &lt;sup&gt;0&lt;/sup&gt;]''<br /> | Isogenic to S288C; used in the systematic sequencing project, the sequence stored in SGD. AB972 is an ethidium bromide-induced rho- derivative of the strain X2180-1B-''trp1''.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000057090 Olson MV et al.] (1986) Proc. Natl. Acad. Sci. USA 83:7826-7830.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.atcc.org/catalog/numSearch/numResults.cfm?atccNum=204511 ATCC: 204511]<br /> |-<br /> |&lt;div id=A364A&gt;A364A<br /> | ''MAT''a'' ade1 ade2 ura1 his7 lys2 tyr1 gal1 SUC mal cup''<br /> | Isogenic to S288C; used in the systematic sequencing project, the sequence stored in SGD.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000079649 Hartwell] (1967) J. Bacteriol. 93:1662-1670.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.atcc.org/catalog/numSearch/numResults.cfm?atccNum=208526 ATCC: 208526]<br /> |-<br /> |&lt;div id=&quot;Sigma_1278B&quot;&gt;Sigma 1278B<br /> |<br /> |<br /> Used in pseudohyphal growth studies. [http://staff.yeastgenome.org/community/sigma.html Detailed notes] about the sigma strains have been kindly provided by Cora Styles.<br /> |<br /> |<br /> |-<br /> |&lt;div id=SK1&gt;SK1 (canavanine-resistant derivative)<br /> | ''MAT''a/α'' HO gal2 cup&lt;sup&gt;S&lt;/sup&gt; can1&lt;sup&gt;R&lt;/sup&gt;''<br /> | Commonly used for studying sporulation or meiosis<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000079650 Kane SM and Roth J.] (1974) Bacteriol. 118: 8-14<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.atcc.org/catalog/numSearch/numResults.cfm?atccNum=204722 ATCC: 204722]<br /> |-<br /> |&lt;div id=CEN.PK2&gt;CEN.PK (aka CEN.PK2)<br /> | ''MAT''a/α'' ura3-52/ura3-52 trp1-289/trp1-289 leu2-3_112/leu2-3_112 his3 ''Δ''1/his3 ''Δ''1 MAL2-8C/MAL2-8C SUC2/SUC2''<br /> |<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000079648 van Dijken et al.] (2000) Enzyme Microb Technol 26:706-714<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://web.uni-frankfurt.de/fb15/mikro/euroscarf/data/cen.html EUROSCARF: 30000D]<br /> |-<br /> |&lt;div id=XJ24-24a&gt;XJ24-24a<br /> | ''MAT''a ''ho HMa HMα ade6 arg4-17 trp1-1 tyr7-1 MAL2''<br /> | Isogenic to S288C; used in the systematic sequencing project, the sequence stored in SGD.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000055409 Strathern et al.] (1979) Cell 18:309-319<br /> |<br /> |-<br /> |&lt;div id=DC5&gt;DC5<br /> | ''MAT''a'' leu2-3,112 his3-11,15 can1-11''<br /> | Isogenic to S288C; used in the systematic sequencing project, the sequence stored in SGD.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000054242 Broach et al.] (1979) Gene 8:121-133<br /> |<br /> |-<br /> |&lt;div id=YNN216&gt;YNN216<br /> | ''MAT''a/α ''ura3-52/ura3-52 lys2-801&lt;sup&gt;amber&lt;/sup&gt;/lys2-801&lt;sup&gt;amber&lt;/sup&gt; ade2-101&lt;sup&gt;ochre&lt;/sup&gt;/ade2-101&lt;sup&gt;ochre&lt;/sup&gt;''<br /> | Congenic to S288C (see Sikorski and Hieter). Used to derive YSS and CY strains (see Sobel and Wolin).<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000044428 Sikorski RS and Hieter P] (1989) Genetics 122:19-27.&lt;br /&gt;[http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000042217 Sobel and Wolin] (1999) Mol. Biol. Cell 10:3849-3862.<br /> |<br /> |-<br /> |&lt;div id=D273-10B&gt;D273-10B<br /> | ''MAT''α ''mal''<br /> | Normal cytochrome content and respiration; low frequency of rho-. This strain and its auxotrophic derivatives were used in numerious laboratories for mitochondrial and related studies and for mutant screens. Good respirer that's relatively resistant to glucose repression.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000080158 Sherman, F.] (1963) Genetics 48:375-385.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.atcc.org/catalog/numSearch/numResults.cfm?atccNum=24657 ATCC: 24657]<br /> |-<br /> |&lt;div id=FL100&gt;FL100<br /> | ''MAT''a<br /> |<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000065623 Lacroute, F.] (1968) J. Bacteriol. 95:824-832.<br /> |<br /> |-<br /> |&lt;div id=YPH499&gt;YPH499<br /> | ''MAT''a ''ura3-52 lys2-801_amber ade2-101_ochre trp1-''Δ''63 his3-''Δ''200 leu2-''Δ''1''<br /> | Contains nonrevertible (deletion) auxotrophic mutations that can be used for selection of vectors. Note that ''trp1-''Δ''63'', unlike ''trp1-''Δ''1'', does not delete adjacent ''GAL3'' UAS sequence and retains homology to ''TRP1'' selectable marker. ''gal2-'', does not use galactose anaerobically. Derived from the diploid strain YNN216 (Johnston and Davis 1984; original source: M. Carlson, Columbia University), which is congenic with S288C.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000044428 Sikorski RS and Hieter P] (1989) Genetics 122:19-27.&lt;br /&gt;[http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000042217 Sobel and Wolin] (1999) Mol. Biol. Cell 10:3849-3862.&lt;br /&gt;[http://db.yeastgenome.org/cgi-bin/reference/reference.pl?pubmed=6092912 Johnston M and Davis RW] (1984) Mol Cell Biol 4(8):1440-8.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.atcc.org/catalog/numSearch/numResults.cfm?atccNum=204679 ATCC: 204679]<br /> |-<br /> |&lt;div id=YPH500&gt;YPH500<br /> | ''MAT''α ''ura3-52 lys2-801_amber ade2-101_ochre trp1-''Δ''63 his3-''Δ''200 leu2-''Δ''1''<br /> |<br /> ''MAT''α strain isogenic to [http://staff.yeastgenome.org/index.php/straintable#yph499 YPH499] except at mating type locus. Derived from the diploid strain YNN216 (Johnston and Davis 1984; original source: M. Carlson, Columbia University), which is congenic with S288C.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000044428 Sikorski RS and Hieter P] (1989) Genetics 122:19-27.&lt;br /&gt;[http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000042217 Sobel and Wolin] (1999) Mol. Biol. Cell 10:3849-3862.&lt;br /&gt;[http://db.yeastgenome.org/cgi-bin/reference/reference.pl?pubmed=6092912 Johnston M and Davis RW] (1984) Mol Cell Biol 4(8):1440-8.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.atcc.org/catalog/numSearch/numResults.cfm?atccNum=204680 ATCC:204680]<br /> |-<br /> |&lt;div id=YPH501&gt;YPH501<br /> | ''MAT''a/''MAT''α ''ura3-52/ura3-52 lys2-801_amber/lys2-801_amber ade2-101_ochre/ade2-101_ochre trp1-''Δ''63/trp1-''Δ''63 his3-''Δ''200/his3-''Δ''200 leu2-''Δ''1/leu2-''Δ''1''<br /> |<br /> a/α diploid isogenic to [http://staff.yeastgenome.org/index.php/straintable#yph499 YPH499] and [http://staff.yeastgenome.org/index.php/straintable#yph500 YPH500]. Derived from the diploid strain YNN216 (Johnston and Davis 1984; original source: M. Carlson, Columbia University), which is congenic with S288C.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000044428 Sikorski RS and Hieter P] (1989) Genetics 122:19-27.&lt;br /&gt;[http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000042217 Sobel and Wolin] (1999) Mol. Biol. Cell 10:3849-3862.&lt;br /&gt;[http://db.yeastgenome.org/cgi-bin/reference/reference.pl?pubmed=6092912 Johnston M and Davis RW] (1984) Mol Cell Biol 4(8):1440-8.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.atcc.org/catalog/numSearch/numResults.cfm?atccNum=204681 ATCC:204681]<br /> |}<br /> <br /> {|<br /> |<br /> | ''''<br /> |<br /> |<br /> |<br /> |}</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Commonly_used_strains&diff=72651 2007-05-10T23:20:44Z

<p>Shuai: New page: = Commonly used ''S. cerevisiae'' strains = This table describes some of the most commonly used yeast lab strains. Much of the information is taken from [http://db.yeastgenome.org/cgi-bin...</p> <hr /> <div>= Commonly used ''S. cerevisiae'' strains =<br /> <br /> This table describes some of the most commonly used yeast lab strains. Much of the information is taken from [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://dbb.urmc.rochester.edu/labs/sherman_f/StartedYeast.html F. Sherman (2002)] Getting started with yeast, Methods Enzymol. 350, 3-41. Other useful papers for strain background information include<br /> <br /> * [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000050744 Mortimer and Johnston] (1986) Genetics 113:35-43 - thoroughly describes the genealogy of strain S288C<br /> * [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000079648 van Dijken et al.] (2000) Enzyme Microb Technol 26:706-714 - compares various characteristics of commonly used lab strains<br /> * [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000080159 Winzeler et al.] (2003) Genetics 163:79-89 - uses SFP (single-feature polymorphisms) analysis to study genetic identity between common lab strains<br /> <br /> Please send e-mail to the curators at SGD at [http://db.yeastgenome.org/cgi-bin/suggestion yeast-curator@genome.stanford.edu] if you have additions or modifications you would like to suggest.<br /> <br /> &lt;blockquote&gt;&lt;blockquote&gt;<br /> <br /> == Strains described on this page ==<br /> <br /> {|<br /> |<br /> * [http://wiki.yeastgenome.org/index.php/straintable#A364A A364A]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#AB972 AB972]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#BY4743 BY4743]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#CEN.PK2 CEN.PK/CEN.PK2]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#D273-10B D273-10B]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#DC5 DC5]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#FL100 FL100]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#FY1679 FY1679]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#S288C S288C]<br /> |<br /> * [http://wiki.yeastgenome.org/index.php/straintable#Sigma_1278B Sigma 1278B]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#SK1 SK1]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#W303 W303]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#X2180-1A X2180-1A]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#XJ24-24a XJ24-24a]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#YNN216 YNN216]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#YPH499 YPH499]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#YPH500 YPH500]<br /> * [http://wiki.yeastgenome.org/index.php/straintable#YPH501 YPH501]<br /> |}<br /> <br /> &lt;/blockquote&gt;&lt;/blockquote&gt;<br /> <br /> {| border=&quot;3&quot;<br /> |- align=&quot;center&quot;<br /> ! width=&quot;5%&quot; | Strain<br /> ! width=&quot;30%&quot; | Genotype<br /> ! width=&quot;30%&quot; | Notes<br /> ! width=&quot;30%&quot; | References<br /> ! width=&quot;5%&quot; | ATCC/Open Biosystems/EUROSCARF<br /> |-<br /> |&lt;div id=S288C&gt;S288C<br /> | ''MAT''α ''SUC2 gal2 mal mel flo1 flo8-1 hap1''<br /> |<br /> Strain used in the systematic sequencing project, the sequence stored in SGD. S288C does not form pseudohyphae. In addition, since it has a mutated copy of [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000004246 ''HAP1''], it is not a good strain for mitochondrial studies. S288C strains are ''gal''2- and they do not use galactose anaerobically.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000050744 Mortimer and Johnston] (1986) Genetics 113:35-43.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.atcc.org/catalog/numSearch/numResults.cfm?atccNum=204508 ATCC: 204508]<br /> |-<br /> |&lt;div id=FY1679&gt;FY1679<br /> | ''MAT''a/α ''ura3-52/ura3-52 trp1''Δ''63/TRP1 leu2''Δ'' 1/LEU2 his3''Δ''200/HIS3 GAL2/GAL''<br /> | Isogenic to S288C; used in the systematic sequencing project, the sequence stored in SGD.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000047446 Winston et al.] (1995) Yeast 11:53-55.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://web.uni-frankfurt.de/fb15/mikro/euroscarf/data/fy1679.html EUROSCARF: 10000D]<br /> |-<br /> |&lt;div id=BY4743&gt;BY4743<br /> | ''MAT''a/α ''his3''Δ''1/his3''Δ''1 leu2''Δ''0/leu2''Δ''0 lys2''Δ''0/LYS2 MET15/met15''Δ''0 ura3''Δ''0/ura3''Δ''0''<br /> |<br /> Strain used in the [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www-sequence.stanford.edu/group/yeast_deletion_project/project_desc.html systematic deletion project], generated from a cross between BY4741 and BY4742, which are derived from S288C. See Brachmann et al. reference for details.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000041186 Brachmann et al.] (1998) Yeast 14:115-32.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.openbiosystems.com/ Open Biosystems: YSC1050]<br /> |-<br /> |&lt;div id=W303&gt;W303<br /> | ''MAT''a/''MAT''α {''leu2-3,112 trp1-1 can1-100 ura3-1 ade2-1 his3-11,15''} [''phi&lt;sup&gt;+&lt;/sup&gt;'']<br /> | W303 also contains a ''bud4'' mutation that causes haploids to bud with a mixture of axial and bipolar budding patterns. In addition, the original W303 strain contains the ''rad5-535'' allele.<br /> | W303 constructed by Rodney Rothstein (''see [http://staff.yeastgenome.org/community/W303.html detailed notes] from RR'').&lt;br /&gt;''bud4'' info: Voth, W.P. et al. (2005) Eukaryotic Cell, in press. &lt;br /&gt;''rad5-535'' info: Fan et al. (1996) Genetics 142:749<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.openbiosystems.com/Genomics/Model Organism Resources/Yeast Resources/Yeast Knockout Strains/ Open Biosystems: YSC1058]<br /> |-<br /> |&lt;div id=W303-1A&gt;W303-1A<br /> | ''MAT''a {''leu2-3,112 trp1-1 can1-100 ura3-1 ade2-1 his3-11,15''}<br /> | W303-1A possesses a ''ybp1-1'' mutation (I7L, F328V, K343E, N571D) which abolishes Ybp1p function, increasing sensitivity to oxidative stress.<br /> |<br /> W303 constructed by Rodney Rothstein (''see [http://staff.yeastgenome.org/community/W303.html detailed notes] from RR'').&lt;br /&gt;''ybp1-1'' info: [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000073844 Veal et al.] (2003) J. Biol. Chem. 278:30896-904.&lt;br /&gt;<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.openbiosystems.com/Genomics/Model Organism Resources/Yeast Resources/Yeast Knockout Strains/ Open Biosystems: YSC1058]<br /> |-<br /> |&lt;div id=W303-1B&gt;W303-1B<br /> | ''MAT''α {''leu2-3,112 trp1-1 can1-100 ura3-1 ade2-1 his3-11,15''}<br /> |<br /> | W303 constructed by Rodney Rothstein (''see [http://staff.yeastgenome.org/community/W303.html detailed notes] from RR'').<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.openbiosystems.com/Genomics/Model Organism Resources/Yeast Resources/Yeast Knockout Strains/ Open Biosystems: YSC1058]<br /> |-<br /> |&lt;div id=X2180-1A&gt;X2180-1A<br /> | ''MAT''a'' SUC2 mal mel gal2 CUP1''<br /> |<br /> | Robert Mortimer, personal comm.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.atcc.org/catalog/numSearch/numResults.cfm?atccNum=204504 ATCC: 204504]<br /> |-<br /> |&lt;div id=AB972&gt;AB972<br /> | ''MAT''α'' X2180-1B trp1&lt;sub&gt;0&lt;/sub&gt; [rho &lt;sup&gt;0&lt;/sup&gt;]''<br /> | Isogenic to S288C; used in the systematic sequencing project, the sequence stored in SGD. AB972 is an ethidium bromide-induced rho- derivative of the strain X2180-1B-''trp1''.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000057090 Olson MV et al.] (1986) Proc. Natl. Acad. Sci. USA 83:7826-7830.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.atcc.org/catalog/numSearch/numResults.cfm?atccNum=204511 ATCC: 204511]<br /> |-<br /> |&lt;div id=A364A&gt;A364A<br /> | ''MAT''a'' ade1 ade2 ura1 his7 lys2 tyr1 gal1 SUC mal cup''<br /> | Isogenic to S288C; used in the systematic sequencing project, the sequence stored in SGD.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000079649 Hartwell] (1967) J. Bacteriol. 93:1662-1670.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.atcc.org/catalog/numSearch/numResults.cfm?atccNum=208526 ATCC: 208526]<br /> |-<br /> |&lt;div id=&quot;Sigma_1278B&quot;&gt;Sigma 1278B<br /> |<br /> |<br /> Used in pseudohyphal growth studies. [http://staff.yeastgenome.org/community/sigma.html Detailed notes] about the sigma strains have been kindly provided by Cora Styles.<br /> |<br /> |<br /> |-<br /> |&lt;div id=SK1&gt;SK1 (canavanine-resistant derivative)<br /> | ''MAT''a/α'' HO gal2 cup&lt;sup&gt;S&lt;/sup&gt; can1&lt;sup&gt;R&lt;/sup&gt;''<br /> | Commonly used for studying sporulation or meiosis<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000079650 Kane SM and Roth J.] (1974) Bacteriol. 118: 8-14<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.atcc.org/catalog/numSearch/numResults.cfm?atccNum=204722 ATCC: 204722]<br /> |-<br /> |&lt;div id=CEN.PK2&gt;CEN.PK (aka CEN.PK2)<br /> | ''MAT''a/α'' ura3-52/ura3-52 trp1-289/trp1-289 leu2-3_112/leu2-3_112 his3 ''Δ''1/his3 ''Δ''1 MAL2-8C/MAL2-8C SUC2/SUC2''<br /> |<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000079648 van Dijken et al.] (2000) Enzyme Microb Technol 26:706-714<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://web.uni-frankfurt.de/fb15/mikro/euroscarf/data/cen.html EUROSCARF: 30000D]<br /> |-<br /> |&lt;div id=XJ24-24a&gt;XJ24-24a<br /> | ''MAT''a ''ho HMa HMα ade6 arg4-17 trp1-1 tyr7-1 MAL2''<br /> | Isogenic to S288C; used in the systematic sequencing project, the sequence stored in SGD.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000055409 Strathern et al.] (1979) Cell 18:309-319<br /> |<br /> |-<br /> |&lt;div id=DC5&gt;DC5<br /> | ''MAT''a'' leu2-3,112 his3-11,15 can1-11''<br /> | Isogenic to S288C; used in the systematic sequencing project, the sequence stored in SGD.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000054242 Broach et al.] (1979) Gene 8:121-133<br /> |<br /> |-<br /> |&lt;div id=YNN216&gt;YNN216<br /> | ''MAT''a/α ''ura3-52/ura3-52 lys2-801&lt;sup&gt;amber&lt;/sup&gt;/lys2-801&lt;sup&gt;amber&lt;/sup&gt; ade2-101&lt;sup&gt;ochre&lt;/sup&gt;/ade2-101&lt;sup&gt;ochre&lt;/sup&gt;''<br /> | Congenic to S288C (see Sikorski and Hieter). Used to derive YSS and CY strains (see Sobel and Wolin).<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000044428 Sikorski RS and Hieter P] (1989) Genetics 122:19-27.&lt;br /&gt;[http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000042217 Sobel and Wolin] (1999) Mol. Biol. Cell 10:3849-3862.<br /> |<br /> |-<br /> |&lt;div id=D273-10B&gt;D273-10B<br /> | ''MAT''α ''mal''<br /> | Normal cytochrome content and respiration; low frequency of rho-. This strain and its auxotrophic derivatives were used in numerious laboratories for mitochondrial and related studies and for mutant screens. Good respirer that's relatively resistant to glucose repression.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000080158 Sherman, F.] (1963) Genetics 48:375-385.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.atcc.org/catalog/numSearch/numResults.cfm?atccNum=24657 ATCC: 24657]<br /> |-<br /> |&lt;div id=FL100&gt;FL100<br /> | ''MAT''a<br /> |<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000065623 Lacroute, F.] (1968) J. Bacteriol. 95:824-832.<br /> |<br /> |-<br /> |&lt;div id=YPH499&gt;YPH499<br /> | ''MAT''a ''ura3-52 lys2-801_amber ade2-101_ochre trp1-''Δ''63 his3-''Δ''200 leu2-''Δ''1''<br /> | Contains nonrevertible (deletion) auxotrophic mutations that can be used for selection of vectors. Note that ''trp1-''Δ''63'', unlike ''trp1-''Δ''1'', does not delete adjacent ''GAL3'' UAS sequence and retains homology to ''TRP1'' selectable marker. ''gal2-'', does not use galactose anaerobically. Derived from the diploid strain YNN216 (Johnston and Davis 1984; original source: M. Carlson, Columbia University), which is congenic with S288C.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000044428 Sikorski RS and Hieter P] (1989) Genetics 122:19-27.&lt;br /&gt;[http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000042217 Sobel and Wolin] (1999) Mol. Biol. Cell 10:3849-3862.&lt;br /&gt;[http://db.yeastgenome.org/cgi-bin/reference/reference.pl?pubmed=6092912 Johnston M and Davis RW] (1984) Mol Cell Biol 4(8):1440-8.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.atcc.org/catalog/numSearch/numResults.cfm?atccNum=204679 ATCC: 204679]<br /> |-<br /> |&lt;div id=YPH500&gt;YPH500<br /> | ''MAT''α ''ura3-52 lys2-801_amber ade2-101_ochre trp1-''Δ''63 his3-''Δ''200 leu2-''Δ''1''<br /> |<br /> ''MAT''α strain isogenic to [http://staff.yeastgenome.org/index.php/straintable#yph499 YPH499] except at mating type locus. Derived from the diploid strain YNN216 (Johnston and Davis 1984; original source: M. Carlson, Columbia University), which is congenic with S288C.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000044428 Sikorski RS and Hieter P] (1989) Genetics 122:19-27.&lt;br /&gt;[http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000042217 Sobel and Wolin] (1999) Mol. Biol. Cell 10:3849-3862.&lt;br /&gt;[http://db.yeastgenome.org/cgi-bin/reference/reference.pl?pubmed=6092912 Johnston M and Davis RW] (1984) Mol Cell Biol 4(8):1440-8.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.atcc.org/catalog/numSearch/numResults.cfm?atccNum=204680 ATCC:204680]<br /> |-<br /> |&lt;div id=YPH501&gt;YPH501<br /> | ''MAT''a/''MAT''α ''ura3-52/ura3-52 lys2-801_amber/lys2-801_amber ade2-101_ochre/ade2-101_ochre trp1-''Δ''63/trp1-''Δ''63 his3-''Δ''200/his3-''Δ''200 leu2-''Δ''1/leu2-''Δ''1''<br /> |<br /> a/α diploid isogenic to [http://staff.yeastgenome.org/index.php/straintable#yph499 YPH499] and [http://staff.yeastgenome.org/index.php/straintable#yph500 YPH500]. Derived from the diploid strain YNN216 (Johnston and Davis 1984; original source: M. Carlson, Columbia University), which is congenic with S288C.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000044428 Sikorski RS and Hieter P] (1989) Genetics 122:19-27.&lt;br /&gt;[http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid=S000042217 Sobel and Wolin] (1999) Mol. Biol. Cell 10:3849-3862.&lt;br /&gt;[http://db.yeastgenome.org/cgi-bin/reference/reference.pl?pubmed=6092912 Johnston M and Davis RW] (1984) Mol Cell Biol 4(8):1440-8.<br /> |<br /> [http://db.yeastgenome.org/cgi-bin/redirect.pl?source=straintable&amp;url=http://www.atcc.org/catalog/numSearch/numResults.cfm?atccNum=204681 ATCC:204681]<br /> |}<br /> <br /> {|<br /> |<br /> | ''''<br /> |<br /> |<br /> |<br /> |}</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:LocusStub&diff=60711 2007-03-20T22:53:29Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> &lt;protect&gt;<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid={{{DBID}}} {{{FEATURE_NAME}}}] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''{{{GENE_NAME}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''{{{ALIASES}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || {{{FEATURE_TYPE}}}<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| {{{LOCATION}}}<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Primary SGDID''' || {{{DBID}}}<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{{FEATURE_NAME}}}:''' {{{HEADLINE}}}{{{REFS}}}<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;/protect&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> {{{COMMUNITY ANNOTATIONS}}}<br /> &lt;protect&gt;<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}<br /> &lt;/protect&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:LocusStub&diff=60710 2007-03-20T22:12:14Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> &lt;protect&gt;<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid={{{DBID}}} {{{FEATURE_NAME}}}] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''{{{GENE_NAME}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''{{{ALIASES}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || {{{FEATURE_TYPE}}}<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| {{{LOCATION}}}<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Primary SGDID''' || {{{DBID}}}<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{{FEATURE_NAME}}}:''' {{{HEADLINE}}}{{{REFS}}}<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;/protect&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> {{{COMMUNITY ANNOTATIONS}}}<br /> <br /> &lt;protect&gt;<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}<br /> &lt;/protect&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:LocusStub&diff=43094 2007-02-27T23:35:09Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> &lt;protect&gt;<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid={{{DBID}}} {{{FEATURE_NAME}}}] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''{{{GENE_NAME}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''{{{ALIASES}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || {{{FEATURE_TYPE}}}<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| {{{LOCATION}}}<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Primary SGDID''' || {{{DBID}}}<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{{FEATURE_NAME}}}:''' {{{HEADLINE}}}{{{REFS}}}<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;/protect&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> {{{COMMUNITY ANNOTATIONS}}}<br /> <br /> <br /> &lt;protect&gt;<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}<br /> &lt;/protect&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:LocusStub&diff=42777 2007-02-22T04:38:33Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> &lt;protect&gt;<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus={{{FEATURE_NAME}}} {{{FEATURE_NAME}}}] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''{{{GENE_NAME}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''{{{ALIASES}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || {{{FEATURE_TYPE}}}<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| {{{LOCATION}}}<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{PAGENAME}}:''' {{{HEADLINE}}}{{{REFS}}}<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;/protect&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> {{{COMMUNITY ANNOTATIONS}}}<br /> <br /> <br /> &lt;protect&gt;<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}<br /> &lt;/protect&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=STA1&diff=42776 2007-02-22T04:37:40Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> &lt;protect&gt;<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=STA1 STA1] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''STA1 ''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''I''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || not physically mapped[[Category:not physically mapped]]<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| Chr IX:<br /> YAL001C..TFC3<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{PAGENAME}}:'''<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;/protect&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> === Interactions ===<br /> [[Category:Topic:Interactions]]<br /> ==== Regulatory ====<br /> [[Category:Topic:Interactions:Regulatory]]<br /> STA1 is regulated by Nrg1. [[Category:Regulated by Nrg1]]Regulatory interaction with Nrg1 [[Category:Regulatory Interactions with Nrg1]]&lt;br&gt;<br /> Nrg1 binds to the promoter of STA1, where it represses transcription of this gene. &lt;ref name='S000053650'&gt;Park SH, et al. (1999) Nrg1 is a transcriptional repressor for glucose repression of STA1 gene expression in Saccharomyces cerevisiae. Mol Cell Biol 19(3):2044-50 {{SGDpaper|S000053650}} PMID 10022891&lt;/ref&gt; &lt;ref name = 'CAset6176-2003-02-12'&gt;submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=6176 Valmik K. Vyas] on 2003-02-12&lt;/ref&gt;<br /> <br /> {{ShortCenteredHR}}<br /> === Protein Details ===<br /> [[Category:Topic:Protein Details]]<br /> ==== Nucleic Acid Binding ====<br /> [[Category:Topic:Protein Details:Nucleic Acid Binding]]<br /> <br /> Nrg1 specifically binds to two regions in the upstream activation sequence of the STA1 gene, as judged by gel retardation and DNase I footprinting analyses. &lt;ref name='S000053650'&gt;Park SH, et al. (1999) Nrg1 is a transcriptional repressor for glucose repression of STA1 gene expression in Saccharomyces cerevisiae. Mol Cell Biol 19(3):2044-50 {{SGDpaper|S000053650}} PMID 10022891&lt;/ref&gt; &lt;ref name = 'CAset6176-2003-02-12'&gt;submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=6176 Valmik K. Vyas] on 2003-02-12&lt;/ref&gt;<br /> <br /> {{ShortCenteredHR}}<br /> <br /> <br /> &lt;!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation --&gt;<br /> &lt;!--<br /> Specifically higher expression in carbon limited chemostat cultures versus carbon excess.<br /> &lt;ref&gt;Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. <br /> J Biol Chem 278(5):3265-74&lt;/ref&gt;<br /> --&gt;<br /> <br /> &lt;protect&gt;<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}<br /> &lt;/protect&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=SUC4&diff=38852 2007-02-22T04:20:56Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> &lt;protect&gt;<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=SUC4 SUC4] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''SUC4 ''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||'' ''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || not physically mapped[[Category:not physically mapped]]<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| not mapped<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{PAGENAME}}:''' <br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;/protect&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> === DNA and RNA Details ===<br /> [[Category:Topic:DNA and RNA Details]]<br /> ==== Other DNA and RNA Details ====<br /> [[Category:Topic:DNA and RNA Details:Other DNA and RNA Details]]<br /> '''Other Topic''': expression [[Category:Topic:expression]]<br /> <br /> Specifically higher expression in carbon limited chemostat cultures versus carbon excess. &lt;ref name='S000073646'&gt;Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. J Biol Chem 278(5):3265-74 {{SGDpaper|S000073646}} PMID 12414795&lt;/ref&gt; &lt;ref name = 'CAset9153-2003-08-06'&gt;submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=9153 Viktor Boer] on 2003-08-06&lt;/ref&gt;<br /> <br /> {{ShortCenteredHR}}<br /> <br /> <br /> <br /> &lt;!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation --&gt;<br /> &lt;!--<br /> Specifically higher expression in carbon limited chemostat cultures versus carbon excess.<br /> &lt;ref&gt;Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. <br /> J Biol Chem 278(5):3265-74&lt;/ref&gt;<br /> --&gt;<br /> <br /> &lt;protect&gt;<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}<br /> &lt;/protect&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=YAL003W&diff=38452 2007-02-22T04:19:22Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> &lt;protect&gt;<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=YAL003W YAL003W] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''EFB1 ''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''TEF5''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || ORF, Verified[[Category:ORF]][[Category:ORF, Verified]]<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| Chr I:142176..143162<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{PAGENAME}}:''' Translation elongation factor 1 beta; stimulates nucleotide exchange to regenerate EF-1 alpha-GTP for the next elongation cycle; part of the EF-1 complex, which facilitates binding of aminoacyl-tRNA to the ribosomal A site&lt;ref name='S000052028'&gt;Kinzy TG and Woolford JL Jr (1995) Increased expression of Saccharomyces cerevisiae translation elongation factor 1 alpha bypasses the lethality of a TEF5 null allele encoding elongation factor 1 beta. Genetics 141(2):481-9<br /> {{SGDpaper|S000052028}} PMID 8647386&lt;/ref&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;/protect&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> <br /> <br /> &lt;!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation --&gt;<br /> &lt;!--<br /> Specifically higher expression in carbon limited chemostat cultures versus carbon excess.<br /> &lt;ref&gt;Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. <br /> J Biol Chem 278(5):3265-74&lt;/ref&gt;<br /> --&gt;<br /> <br /> &lt;protect&gt;<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}<br /> &lt;/protect&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=YAL002W&diff=38282 2007-02-22T04:18:46Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> &lt;protect&gt;<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=YAL002W YAL002W] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''VPS8 ''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''FUN15, VPT8''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || ORF, Verified[[Category:ORF]][[Category:ORF, Verified]]<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| Chr I:143709..147533<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{PAGENAME}}:''' Membrane-associated hydrophilic protein that interacts with the small GTPase, Vps21p, to facilitate soluble vacuolar protein localization; required for localization and trafficking of the CPY sorting receptor; contains a RING finger motif&lt;ref name='S000048903'&gt;Chen YJ and Stevens TH (1996) The VPS8 gene is required for localization and trafficking of the CPY sorting receptor in Saccharomyces cerevisiae. Eur J Cell Biol 70(4):289-97 {{SGDpaper|S000048903}} PMID 8864656&lt;/ref&gt;&lt;ref name='S000043091'&gt;Luo W and Chang A (1997) Novel genes involved in endosomal traffic in yeast revealed by suppression of a targeting-defective plasma membrane ATPase mutant. J Cell Biol 138(4):731-46 {{SGDpaper|S000043091}} PMID 9265642&lt;/ref&gt;&lt;ref name='S000043076'&gt;Horazdovsky BF, et al. (1996) A novel RING finger protein, Vps8p, functionally interacts with the small GTPase, Vps21p, to facilitate soluble vacuolar protein localization. J Biol Chem 271(52):33607-15<br /> {{SGDpaper|S000043076}} PMID 8969229&lt;/ref&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;/protect&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> <br /> <br /> &lt;!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation --&gt;<br /> &lt;!--<br /> Specifically higher expression in carbon limited chemostat cultures versus carbon excess.<br /> &lt;ref&gt;Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. <br /> J Biol Chem 278(5):3265-74&lt;/ref&gt;<br /> --&gt;<br /> <br /> &lt;protect&gt;<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}<br /> &lt;/protect&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=YAL005C&diff=38088 2007-02-22T04:18:01Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> &lt;protect&gt;<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=YAL005C YAL005C] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''SSA1 ''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''YG100''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || ORF, Verified[[Category:ORF]][[Category:ORF, Verified]]<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| Chr I:141433..139505<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{PAGENAME}}:''' ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport; member of heat shock protein 70 (HSP70) family; forms a chaperone complex with Ydj1p; localized to the nucleus, cytoplasm, and cell wall&lt;ref name='S000052334'&gt;Bush GL and Meyer DI (1996) The refolding activity of the yeast heat shock proteins Ssa1 and Ssa2 defines their role in protein translocation. J Cell Biol 135(5):1229-37 {{SGDpaper|S000052334}} PMID 8947547&lt;/ref&gt;&lt;ref name='S000049386'&gt;Ziegelhoffer T, et al. (1995) The dissociation of ATP from hsp70 of Saccharomyces cerevisiae is stimulated by both Ydj1p and peptide substrates. J Biol Chem 270(18):10412-9 {{SGDpaper|S000049386}} PMID 7737974&lt;/ref&gt;&lt;ref name='S000046800'&gt;Shulga N, et al. (1999) A nuclear export signal prevents Saccharomyces cerevisiae Hsp70 Ssb1p from stimulating nuclear localization signal-directed nuclear transport. J Biol Chem 274(23):16501-7 {{SGDpaper|S000046800}} PMID 10347213&lt;/ref&gt;&lt;ref name='S000045677'&gt;Kim S, et al. (1998) Folding in vivo of a newly translated yeast cytosolic enzyme is mediated by the SSA class of cytosolic yeast Hsp70 proteins. Proc Natl Acad Sci U S A 95(22):12860-5 {{SGDpaper|S000045677}} PMID 9789005&lt;/ref&gt;&lt;ref name='S000043439'&gt;Lopez-Ribot JL and Chaffin WL (1996) Members of the Hsp70 family of proteins in the cell wall of Saccharomyces cerevisiae. J Bacteriol 178(15):4724-6<br /> {{SGDpaper|S000043439}} PMID 8755907&lt;/ref&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;/protect&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> === Interactions ===<br /> [[Category:Topic:Interactions]]<br /> ==== Physical ====<br /> [[Category:Topic:Interactions:Physical]]<br /> Physical interaction with FES1 [[Category:Physical Interactions with FES1]]&lt;br&gt;<br /> Purified GST-Fes1p interacts with the ADP-bound form of (His6)-Ssa1p in GST pull down assays &lt;ref name='S000072758'&gt;Kabani M, et al. (2002) Nucleotide exchange factor for the yeast Hsp70 molecular chaperone Ssa1p. Mol Cell Biol 22(13):4677-89 {{SGDpaper|S000072758}} PMID 12052876&lt;/ref&gt; &lt;ref name = 'CAset9225-2003-03-31'&gt;submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=9225 Mehdi Kabani] on 2003-03-31&lt;/ref&gt;<br /> <br /> {{ShortCenteredHR}}<br /> ==== Regulatory ====<br /> [[Category:Topic:Interactions:Regulatory]]<br /> YAL005C is regulated by cns1. [[Category:Regulated by cns1]]Regulatory interaction with cns1 [[Category:Regulatory Interactions with cns1]]&lt;br&gt;<br /> Cns1 exhibits no influence on the ATPase of Hsp90. However, it activates the ATPase of Ssa1 up to 30-fold by accelerating the rate-limiting ATP hydrolysis step. This stimulating effect is mediated by the N-terminal TPR-containing part of Cns1, whereas the C-terminal part showed no effect. &lt;ref name='S000076436'&gt;Hainzl O, et al. (2004) Cns1 is an activator of the Ssa1 ATPase activity. J Biol Chem 279(22):23267-73 {{SGDpaper|S000076436}} PMID 15044454&lt;/ref&gt; &lt;ref name = 'CAset9598-2004-07-15'&gt;submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=9598 Dr. Harald Wegele] on 2004-07-15&lt;/ref&gt;<br /> <br /> {{ShortCenteredHR}}<br /> YAL005C is regulated by Sti1. [[Category:Regulated by Sti1]]Regulatory interaction with Sti1 [[Category:Regulatory Interactions with Sti1]]&lt;br&gt;<br /> Binding of Sti1 to Ssa1 activates the ATPase of Ssa1 by a factor of about 200, which is in contrast to the behaviour of Hop in the mammalian Hsp70 system. Analysis of the underlying activation mechanism revealed that ATP hydrolysis is rate limiting in the Ssa1 ATPase cycle and that this step is accelerated by Sti1. &lt;ref name='S000073412'&gt;Wegele H, et al. (2003) Sti1 is a novel activator of the Ssa proteins. J Biol Chem 278(28):25970-6 {{SGDpaper|S000073412}} PMID 12716905&lt;/ref&gt; &lt;ref name = 'CAset9598-2003-09-03'&gt;submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=9598 Dr. Harald Wegele] on 2003-09-03&lt;/ref&gt;<br /> <br /> {{ShortCenteredHR}}<br /> ==== Two Hybrid ====<br /> [[Category:Topic:Interactions:Two Hybrid]]<br /> Two Hybrid interaction with Sti1 [[Category:Two Hybrid Interactions with Sti1]]&lt;br&gt;<br /> With a two hybrid approach and coimmunoprecipitations, we show that Sti1 specifically interacts with the Ssa group of the cytosolic yeast Hsp70 proteins and not with the Ssb, Sse and Ssz group. &lt;ref name='S000073412'&gt;Wegele H, et al. (2003) Sti1 is a novel activator of the Ssa proteins. J Biol Chem 278(28):25970-6 {{SGDpaper|S000073412}} PMID 12716905&lt;/ref&gt; &lt;ref name = 'CAset9598-2003-09-03'&gt;submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=9598 Dr. Harald Wegele] on 2003-09-03&lt;/ref&gt;<br /> <br /> {{ShortCenteredHR}}<br /> <br /> <br /> <br /> &lt;!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation --&gt;<br /> &lt;!--<br /> Specifically higher expression in carbon limited chemostat cultures versus carbon excess.<br /> &lt;ref&gt;Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. <br /> J Biol Chem 278(5):3265-74&lt;/ref&gt;<br /> --&gt;<br /> <br /> &lt;protect&gt;<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}<br /> &lt;/protect&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:LocusStub&diff=33788 2007-02-22T03:28:09Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> &lt;protect&gt;<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus={{{FEATURE_NAME}}} {{{FEATURE_NAME}}}] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''{{{GENE_NAME}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''{{{ALIASES}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || {{{FEATURE_TYPE}}}<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| {{{LOCATION}}}<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{PAGENAME}}:''' {{{HEADLINE}}}{{{REFS}}}<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;/protect&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> {{{COMMUNITY ANNOTATIONS}}}<br /> <br /> <br /> &lt;!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation --&gt;<br /> &lt;!--<br /> Specifically higher expression in carbon limited chemostat cultures versus carbon excess.<br /> &lt;ref&gt;Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. <br /> J Biol Chem 278(5):3265-74&lt;/ref&gt;<br /> --&gt;<br /> <br /> &lt;protect&gt;<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}<br /> &lt;/protect&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=STA1&diff=33776 2007-02-22T01:06:56Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> &lt;protect&gt;<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=STA1 STA1] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''STA1 ''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''I''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || not physically mapped[[Category:not physically mapped]]<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| Chr IX:<br /> YAL001C..TFC3<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{PAGENAME}}:'''<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;/protect&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> === Interactions ===<br /> [[Category:Topic:Interactions]]<br /> ==== Regulatory ====<br /> [[Category:Topic:Interactions:Regulatory]]<br /> STA1 is regulated by Nrg1. [[Category:Regulated by Nrg1]]Regulatory interaction with Nrg1 [[Category:Regulatory Interactions with Nrg1]]&lt;br&gt;<br /> Nrg1 binds to the promoter of STA1, where it represses transcription of this gene. &lt;ref name='S000053650'&gt;Park SH, et al. (1999) Nrg1 is a transcriptional repressor for glucose repression of STA1 gene expression in Saccharomyces cerevisiae. Mol Cell Biol 19(3):2044-50 {{SGDpaper|S000053650}} PMID 10022891&lt;/ref&gt; &lt;ref name = 'CAset6176-2003-02-12'&gt;submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=6176 Valmik K. Vyas] on 2003-02-12&lt;/ref&gt;<br /> <br /> {{ShortCenteredHR}}<br /> === Protein Details ===<br /> [[Category:Topic:Protein Details]]<br /> ==== Nucleic Acid Binding ====<br /> [[Category:Topic:Protein Details:Nucleic Acid Binding]]<br /> <br /> Nrg1 specifically binds to two regions in the upstream activation sequence of the STA1 gene, as judged by gel retardation and DNase I footprinting analyses. &lt;ref name='S000053650'&gt;Park SH, et al. (1999) Nrg1 is a transcriptional repressor for glucose repression of STA1 gene expression in Saccharomyces cerevisiae. Mol Cell Biol 19(3):2044-50 {{SGDpaper|S000053650}} PMID 10022891&lt;/ref&gt; &lt;ref name = 'CAset6176-2003-02-12'&gt;submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=6176 Valmik K. Vyas] on 2003-02-12&lt;/ref&gt;<br /> <br /> {{ShortCenteredHR}}<br /> <br /> &lt;protect&gt;<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}<br /> &lt;/protect&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=STA1&diff=33772 2007-02-22T01:03:46Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> &lt;protect&gt;<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=STA1 STA1] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''STA1 ''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''I''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || not physically mapped[[Category:not physically mapped]]<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| Chr IX:<br /> YAL001C..TFC3<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{PAGENAME}}:''' ORF, Verified&lt;ref name='1'&gt; {{SGDpaper|1}} PMID &lt;/ref&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;/protect&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> === Interactions ===<br /> [[Category:Topic:Interactions]]<br /> ==== Regulatory ====<br /> [[Category:Topic:Interactions:Regulatory]]<br /> STA1 is regulated by Nrg1. [[Category:Regulated by Nrg1]]Regulatory interaction with Nrg1 [[Category:Regulatory Interactions with Nrg1]]&lt;br&gt;<br /> Nrg1 binds to the promoter of STA1, where it represses transcription of this gene. &lt;ref name='S000053650'&gt;Park SH, et al. (1999) Nrg1 is a transcriptional repressor for glucose repression of STA1 gene expression in Saccharomyces cerevisiae. Mol Cell Biol 19(3):2044-50 {{SGDpaper|S000053650}} PMID 10022891&lt;/ref&gt; &lt;ref name = 'CAset6176-2003-02-12'&gt;submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=6176 Valmik K. Vyas] on 2003-02-12&lt;/ref&gt;<br /> <br /> {{ShortCenteredHR}}<br /> === Protein Details ===<br /> [[Category:Topic:Protein Details]]<br /> ==== Nucleic Acid Binding ====<br /> [[Category:Topic:Protein Details:Nucleic Acid Binding]]<br /> <br /> Nrg1 specifically binds to two regions in the upstream activation sequence of the STA1 gene, as judged by gel retardation and DNase I footprinting analyses. &lt;ref name='S000053650'&gt;Park SH, et al. (1999) Nrg1 is a transcriptional repressor for glucose repression of STA1 gene expression in Saccharomyces cerevisiae. Mol Cell Biol 19(3):2044-50 {{SGDpaper|S000053650}} PMID 10022891&lt;/ref&gt; &lt;ref name = 'CAset6176-2003-02-12'&gt;submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=6176 Valmik K. Vyas] on 2003-02-12&lt;/ref&gt;<br /> <br /> {{ShortCenteredHR}}<br /> <br /> &lt;protect&gt;<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}<br /> &lt;/protect&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:LocusStub&diff=33764 2007-02-22T00:57:21Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> &lt;protect&gt;<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus={{{FEATURE_NAME}}} {{{FEATURE_NAME}}}] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''{{{GENE_NAME}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''{{{ALIASES}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || {{{FEATURE_TYPE}}}<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| {{{LOCATION}}}<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{PAGENAME}}:''' {{{HEADLINE}}}{{{REFS}}}<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;/protect&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> {{{COMMUNITY ANNOTATIONS}}}<br /> <br /> <br /> &lt;!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation --&gt;<br /> &lt;!--<br /> Specifically higher expression in carbon limited chemostat cultures versus carbon excess.<br /> &lt;ref&gt;Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. <br /> J Biol Chem 278(5):3265-74&lt;/ref&gt;<br /> --&gt;<br /> &lt;protect&gt;<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}<br /> &lt;/protect&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=YAL001C&diff=33763 2007-02-21T19:57:40Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> &lt;protect&gt;<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=YAL001C YAL001C] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''TFC3 ''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''FUN24, TSV115''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || ORF, Verified[[Category:ORF]][[Category:ORF, Verified]]<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| Chr I:151168..147596<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{PAGENAME}}:''' Largest of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC); part of the TauB domain of TFIIIC that binds DNA at the BoxB promoter sites of tRNA and similar genes; cooperates with Tfc6p in DNA binding&lt;ref name='S000080885'&gt;Schultz P, et al. (1989) The two DNA-binding domains of yeast transcription factor tau as observed by scanning transmission electron microscopy. EMBO J 8(12):3815-24 {{SGDpaper|S000080885}} PMID 2684647&lt;/ref&gt;&lt;ref name='S000074163'&gt;Geiduschek EP and Kassavetis GA (2001) The RNA polymerase III transcription apparatus. J Mol Biol 310(1):1-26 {{SGDpaper|S000074163}} PMID 11419933&lt;/ref&gt;&lt;ref name='S000043591'&gt;Conesa C, et al. (1993) On the subunit composition, stoichiometry, and phosphorylation of the yeast transcription factor TFIIIC/tau. J Biol Chem 268(24):18047-52 {{SGDpaper|S000043591}} PMID 7688737&lt;/ref&gt;&lt;ref name='S000039580'&gt;Lefebvre O, et al. (1992) TFC3: gene encoding the B-block binding subunit of the yeast transcription factor IIIC. Proc Natl Acad Sci U S A 89(21):10512-6<br /> {{SGDpaper|S000039580}} PMID 1279682&lt;/ref&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;/protect&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> <br /> <br /> &lt;protect&gt;<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}<br /> &lt;/protect&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:LocusStub&diff=24824 2007-01-30T23:04:48Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> &lt;protect&gt;<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus={{{FEATURE_NAME}}} {{{FEATURE_NAME}}}] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''{{{GENE_NAME}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''{{{ALIASES}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || {{{FEATURE_TYPE}}}<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| {{{LOCATION}}}<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{PAGENAME}}:''' {{{HEADLINE}}}{{{REFS}}}<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;/protect&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> {{{COMMUNITY ANNOTATIONS}}}<br /> <br /> &lt;protect&gt;<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}<br /> &lt;/protect&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:LocusStub&diff=24823 2007-01-30T22:58:24Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> &lt;protect&gt;<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus={{{FEATURE_NAME}}} {{{FEATURE_NAME}}}] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''{{{GENE_NAME}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''{{{ALIASES}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || {{{FEATURE_TYPE}}}<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| {{{LOCATION}}}<br /> |-<br /> |colspan = '3'|{{Don'tEditThisBox}}<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{PAGENAME}}:''' {{{HEADLINE}}}{{{REFS}}}<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;/protect&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> {{{COMMUNITY ANNOTATIONS}}}<br /> <br /> &lt;protect&gt;<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}<br /> &lt;/protect&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:LocusStub&diff=24822 2007-01-30T22:57:29Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> &lt;protect&gt;<br /> {{PageTop}}<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus={{{FEATURE_NAME}}} {{{FEATURE_NAME}}}] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''{{{GENE_NAME}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''{{{ALIASES}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || {{{FEATURE_TYPE}}}<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| {{{LOCATION}}}<br /> |-<br /> |colspan = '3'|{{Don'tEditThisBox}}<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{PAGENAME}}:''' {{{HEADLINE}}}{{{REFS}}}<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;/protect&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> {{{COMMUNITY ANNOTATIONS}}}<br /> <br /> &lt;protect&gt;<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}<br /> &lt;/protect&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:PageTop&diff=23614 2007-01-30T17:54:31Z

<p>Shuai: </p> <hr /> <div>'''Share your knowledge...[http://wiki.yeastgenome.org/index.php?title={{PAGENAMEE}}&amp;action=edit&amp;section=1 Edit this entry]!'''</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:LocusStub&diff=23612 2007-01-24T19:36:01Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus={{{FEATURE_NAME}}} {{{FEATURE_NAME}}}] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''{{{GENE_NAME}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''{{{ALIASES}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || {{{FEATURE_TYPE}}}<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| {{{LOCATION}}}<br /> |-<br /> |colspan = '3'|{{Don'tEditThisBox}}<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{PAGENAME}}:''' {{{HEADLINE}}}{{{REFS}}}<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> {{{COMMUNITY ANNOTATIONS}}}<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:LocusStub&diff=23611 2007-01-24T19:35:16Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus={{{FEATURE_NAME}}} {{{FEATURE_NAME}}}] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''{{{GENE_NAME}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''{{{ALIASES}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || {{{FEATURE_TYPE}}}<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| {{{LOCATION}}}<br /> |-<br /> |colspan = '3'|{{Don'tEditThisBox}}<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{PAGENAME}}:''' {{{HEADLINE}}}{{{REFS}}}<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> {{{COMMUNITY ANNOTATIONS}}}<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:LocusStub&diff=23610 2007-01-24T19:34:30Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus={{{FEATURE_NAME}}} {{{FEATURE_NAME}}}] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''{{{GENE_NAME}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''{{{ALIASES}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || {{{FEATURE_TYPE}}}<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| {{{LOCATION}}}<br /> |-<br /> |colspan = '3'|{{Don'tEditThisBox}}<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{PAGENAME}}:''' {{{HEADLINE}}}{{{REFS}}}<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> {{{COMMUNITY ANNOTATIONS}}}<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}</div>

Shuai https://wiki.yeastgenome.org/index.php?title=SUC4&diff=20585 2007-01-24T18:16:59Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=SUC4 SUC4] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''SUC4 ''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||'' ''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || not physically mapped[[Category:not physically mapped]]<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| not mapped<br /> |-<br /> |colspan = '3'|{{Don'tEditThisBox}}<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{PAGENAME}}:''' <br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> === DNA and RNA Details ===<br /> [[Category:Topic:DNA and RNA Details]]<br /> ==== Other DNA and RNA Details ====<br /> [[Category:Topic:DNA and RNA Details:Other DNA and RNA Details]]<br /> '''Other Topic''': expression [[Category:Topic:expression]]<br /> <br /> Specifically higher expression in carbon limited chemostat cultures versus carbon excess. &lt;ref name='S000073646'&gt;Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. J Biol Chem 278(5):3265-74 {{SGDpaper|S000073646}} PMID 12414795&lt;/ref&gt; &lt;ref name = 'CAset9153-2003-08-06'&gt;submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=9153 Viktor Boer] on 2003-08-06&lt;/ref&gt;<br /> <br /> {{ShortCenteredHR}}<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> === DNA and RNA Details ===<br /> [[Category:Topic:DNA and RNA Details]]<br /> ==== Other DNA and RNA Details ====<br /> [[Category:Topic:DNA and RNA Details:Other DNA and RNA Details]]<br /> '''Other Topic''': expression [[Category:Topic:expression]]<br /> <br /> Specifically higher expression in carbon limited chemostat cultures versus carbon excess. &lt;ref name='S000073646'&gt;Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. J Biol Chem 278(5):3265-74 {{SGDpaper|S000073646}} PMID 12414795&lt;/ref&gt; &lt;ref name = 'CAset9153-2003-08-06'&gt;submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=9153 Viktor Boer] on 2003-08-06&lt;/ref&gt;<br /> <br /> {{ShortCenteredHR}}<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}</div>

Shuai https://wiki.yeastgenome.org/index.php?title=SUC4&diff=20584 2007-01-24T18:16:41Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=SUC4 SUC4] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''SUC4 ''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||'' ''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || not physically mapped[[Category:not physically mapped]]<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| not mapped<br /> |-<br /> |colspan = '3'|{{Don'tEditThisBox}}<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{PAGENAME}}:''' <br /> &lt;br&gt;&lt;br&gt;&lt;br&gt;&lt;br&gt;<br /> === DNA and RNA Details ===<br /> [[Category:Topic:DNA and RNA Details]]<br /> ==== Other DNA and RNA Details ====<br /> [[Category:Topic:DNA and RNA Details:Other DNA and RNA Details]]<br /> '''Other Topic''': expression [[Category:Topic:expression]]<br /> <br /> Specifically higher expression in carbon limited chemostat cultures versus carbon excess. &lt;ref name='S000073646'&gt;Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. J Biol Chem 278(5):3265-74 {{SGDpaper|S000073646}} PMID 12414795&lt;/ref&gt; &lt;ref name = 'CAset9153-2003-08-06'&gt;submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=9153 Viktor Boer] on 2003-08-06&lt;/ref&gt;<br /> <br /> {{ShortCenteredHR}}<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> === DNA and RNA Details ===<br /> [[Category:Topic:DNA and RNA Details]]<br /> ==== Other DNA and RNA Details ====<br /> [[Category:Topic:DNA and RNA Details:Other DNA and RNA Details]]<br /> '''Other Topic''': expression [[Category:Topic:expression]]<br /> <br /> Specifically higher expression in carbon limited chemostat cultures versus carbon excess. &lt;ref name='S000073646'&gt;Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. J Biol Chem 278(5):3265-74 {{SGDpaper|S000073646}} PMID 12414795&lt;/ref&gt; &lt;ref name = 'CAset9153-2003-08-06'&gt;submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=9153 Viktor Boer] on 2003-08-06&lt;/ref&gt;<br /> <br /> {{ShortCenteredHR}}<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}</div>

Shuai https://wiki.yeastgenome.org/index.php?title=STA1&diff=19754 2007-01-24T18:07:43Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=STA1 STA1] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''STA1 ''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''DEX2, MAL5''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || not physically mapped[[Category:not physically mapped]]<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| Chr IX:..<br /> |-<br /> |colspan = '3'|{{Don'tEditThisBox}}<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{PAGENAME}}:''' <br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> <br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}</div>

Shuai https://wiki.yeastgenome.org/index.php?title=STA1&diff=19473 2007-01-24T18:01:28Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=STA1 STA1] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''STA1 ''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''DEX2, MAL5''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || not physically mapped[[Category:not physically mapped]]<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| Chr IX:..<br /> |-<br /> |colspan = '3'|{{Don'tEditThisBox}}<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{PAGENAME}}:''' <br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> === Interactions ===<br /> [[Category:Topic:Interactions]]<br /> ==== Regulatory ====<br /> [[Category:Topic:Interactions:Regulatory]]<br /> STA1 is regulated by Nrg1. [[Category:Regulated by Nrg1]]Regulatory interaction with Nrg1 [[Category:Regulatory Interactions with Nrg1]]&lt;br&gt;<br /> Nrg1 binds to the promoter of STA1, where it represses transcription of this gene. &lt;ref name='S000053650'&gt;Park SH, et al. (1999) Nrg1 is a transcriptional repressor for glucose repression of STA1 gene expression in Saccharomyces cerevisiae. Mol Cell Biol 19(3):2044-50 {{SGDpaper|S000053650}} PMID 10022891&lt;/ref&gt; &lt;ref name = 'CAset6176-2003-02-12'&gt;submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=6176 Valmik K. Vyas] on 2003-02-12&lt;/ref&gt;<br /> <br /> {{ShortCenteredHR}}<br /> === Protein Details ===<br /> [[Category:Topic:Protein Details]]<br /> ==== Nucleic Acid Binding ====<br /> [[Category:Topic:Protein Details:Nucleic Acid Binding]]<br /> <br /> Nrg1 specifically binds to two regions in the upstream activation sequence of the STA1 gene, as judged by gel retardation and DNase I footprinting analyses. &lt;ref name='S000053650'&gt;Park SH, et al. (1999) Nrg1 is a transcriptional repressor for glucose repression of STA1 gene expression in Saccharomyces cerevisiae. Mol Cell Biol 19(3):2044-50 {{SGDpaper|S000053650}} PMID 10022891&lt;/ref&gt; &lt;ref name = 'CAset6176-2003-02-12'&gt;submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=6176 Valmik K. Vyas] on 2003-02-12&lt;/ref&gt;<br /> <br /> {{ShortCenteredHR}}<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:SGDblue&diff=1512 2007-01-23T23:18:31Z

<p>Shuai: </p> <hr /> <div> #CCCCFF</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:LocusStub&diff=1511 2007-01-23T23:17:39Z

<p>Shuai: </p> <hr /> <div>&lt;!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN--&gt;<br /> {{PageTop}}<br /> {|{{Prettytable}} align = 'right' width = '200px'<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus={{{FEATURE_NAME}}} {{{FEATURE_NAME}}}] <br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Gene name''' ||''{{{GENE_NAME}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Aliases''' ||''{{{ALIASES}}}''<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Feature type''' || {{{FEATURE_TYPE}}}<br /> |-<br /> |valign=&quot;top&quot; nowrap bgcolor=&quot;{{SGDblue}}&quot;| '''Coordinates'''<br /> |nowrap| {{{LOCATION}}}<br /> |-<br /> |colspan = '3'|{{Don'tEditThisBox}}<br /> |}<br /> &lt;br&gt;<br /> '''Description of {{PAGENAME}}:''' {{{HEADLINE}}}{{{REFS}}}<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> &lt;br&gt;<br /> <br /> __TOC__<br /> ==Community Commentary==<br /> {{CommentaryHelp}}<br /> {{{COMMUNITY ANNOTATIONS}}}<br /> ==References==<br /> &lt;!-- REFERENCES ARE AUTOMATICALLY GENERATED. PLEASE DON'T EDIT THIS SECTION--&gt;<br /> {{RefHelp}}</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:CategoryStub&diff=1510 2007-01-23T23:17:04Z

<p>Shuai: </p> <hr /> <div>Write a help page about the Category pages...</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:CommentaryHelp&diff=1509 2007-01-23T23:16:26Z

<p>Shuai: </p> <hr /> <div>&lt;small&gt;[[About Community Commentary]]. Please share your knowledge!&lt;/small&gt;<br /> &lt;br&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:Don%27tEditThisBox&diff=1508 2007-01-23T23:15:48Z

<p>Shuai: </p> <hr /> <div>&lt;small&gt;Don't edit this box! It's automatically regenerated, and edits will be lost when the update script runs.</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:LocationImageThumb&diff=1507 2007-01-23T23:15:11Z

<p>Shuai: </p> <hr /> <div>{|{{Prettytable}}<br /> |-<br /> !SGD ORF map||GBrowse<br /> |-valign=&quot;top&quot;<br /> |http://db.yeastgenome.org/cgi-bin/ORFMAP/miniORFmap?dbid={{{1}}}&amp;.png<br /> |http://db.yeastgenome.org/cgi-bin/gbrowse_img/scgenome-minimap/?abs=1;options=Everything%200;width=85;name=ChrXVI:78711..83356&amp;.png<br /> |}</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:PageTop&diff=1506 2007-01-23T23:14:28Z

<p>Shuai: </p> <hr /> <div>'''Share your knowledge...[http://yeastgenome-devwiki.stanford.edu/index.php?title={{PAGENAMEE}}&amp;action=edit&amp;section=1 Edit this entry]!'''</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:Prettytable&diff=1505 2007-01-23T23:13:54Z

<p>Shuai: </p> <hr /> <div>border=&quot;2&quot; cellpadding=&quot;4&quot; cellspacing=&quot;0&quot; style=&quot;margin: 1em 1em 1em 0; background: #f9f9f9; border: 1px #aaa solid; border-collapse: collapse;&quot;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:RefHelp&diff=1504 2007-01-23T23:12:52Z

<p>Shuai: </p> <hr /> <div>&lt;small&gt;See [[Help:References]] on how to add references&lt;/small&gt;<br /> &lt;references/&gt;<br /> &lt;small&gt;See [[Help:Categories]] on how to add the wiki page for this gene to a Category&lt;/small&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:SGDblue&diff=1503 2007-01-23T23:12:18Z

<p>Shuai: </p> <hr /> <div>#CCCCFF</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:SGDpaper&diff=1502 2007-01-23T23:11:43Z

<p>Shuai: </p> <hr /> <div>[http://db.yeastgenome.org/cgi-bin/reference/reference.pl?dbid={{{1}}} SGD]</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:SGDred&diff=1501 2007-01-23T23:10:51Z

<p>Shuai: </p> <hr /> <div>#FFFFFFF</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:ShortCenteredHR&diff=1500 2007-01-23T23:09:58Z

<p>Shuai: </p> <hr /> <div>&lt;hr style = 'margin-left:100px;margin-right:100px'&gt;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:cellSGDblue&diff=1499 2007-01-23T23:09:02Z

<p>Shuai: </p> <hr /> <div>bgcolor=&quot;{{SGDblue}}&quot;</div>

Shuai https://wiki.yeastgenome.org/index.php?title=Template:disambig&diff=1498 2007-01-23T23:08:07Z

<p>Shuai: </p> <hr /> <div>[[Category:Disambiguation]]</div>

Shuai