Difference between revisions of "Systematic Sequencing Table"

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<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=1&beg=1&end=230,218 Gene/Sequence Resources]
 
<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=1&beg=1&end=230,218 Gene/Sequence Resources]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr01.fsa Download FASTA]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr01.fsa Download FASTA]
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<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=2&beg=1&end=813,184 Gene/Sequence Resources]
 
<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=2&beg=1&end=813,184 Gene/Sequence Resources]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr02.fsa Download FASTA]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr02.fsa Download FASTA]
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<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=3&beg=1&end=316,620 Gene/Sequence Resources]
 
<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=3&beg=1&end=316,620 Gene/Sequence Resources]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr03.fsa Download FASTA]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr03.fsa Download FASTA]
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<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=4&beg=1&end=1,531,933 Gene/Sequence Resources]
 
<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=4&beg=1&end=1,531,933 Gene/Sequence Resources]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr04.fsa Download FASTA]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr04.fsa Download FASTA]
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<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=5&beg=1&end=576,874 Gene/Sequence Resources]
 
<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=5&beg=1&end=576,874 Gene/Sequence Resources]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr05.fsa Download FASTA]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr05.fsa Download FASTA]
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<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=6&beg=1&end=270,161 Gene/Sequence Resources]
 
<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=6&beg=1&end=270,161 Gene/Sequence Resources]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr06.fsa Download FASTA]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr06.fsa Download FASTA]
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<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=7&beg=1&end=1,090,940 Gene/Sequence Resources]
 
<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=7&beg=1&end=1,090,940 Gene/Sequence Resources]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr07.fsa Download FASTA]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr07.fsa Download FASTA]
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<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=8&beg=1&end=562,643 Gene/Sequence Resources]
 
<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=8&beg=1&end=562,643 Gene/Sequence Resources]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr08.fsa Download FASTA]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr08.fsa Download FASTA]
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<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=9&beg=1&end=439,888 Gene/Sequence Resources]
 
<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=9&beg=1&end=439,888 Gene/Sequence Resources]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr09.fsa Download FASTA]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr09.fsa Download FASTA]
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<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=10&beg=1&end=745,751 Gene/Sequence Resources]
 
<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=10&beg=1&end=745,751 Gene/Sequence Resources]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr10.fsa Download FASTA]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr10.fsa Download FASTA]
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<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=11&beg=1&end=666,816 Gene/Sequence Resources]
 
<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=11&beg=1&end=666,816 Gene/Sequence Resources]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr11.fsa Download FASTA]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr11.fsa Download FASTA]
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| [http://www.yeastgenome.org/contig/Chromosome_XII/overview XII]  
 
| [http://www.yeastgenome.org/contig/Chromosome_XII/overview XII]  
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<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=12&beg=1&end=1,078,177 Gene/Sequence Resources]
 
<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=12&beg=1&end=1,078,177 Gene/Sequence Resources]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr12.fsa Download FASTA]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr12.fsa Download FASTA]
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|[http://www.yeastgenome.org/contig/Chromosome_XIII/overview XIII]  
 
|[http://www.yeastgenome.org/contig/Chromosome_XIII/overview XIII]  
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<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=13&beg=1&end=924,431 Gene/Sequence Resources]
 
<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=13&beg=1&end=924,431 Gene/Sequence Resources]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr13.fsa Download FASTA]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr13.fsa Download FASTA]
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| [http://www.yeastgenome.org/contig/Chromosome_XIV/overview XIV]   
 
| [http://www.yeastgenome.org/contig/Chromosome_XIV/overview XIV]   
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<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=14&beg=1&end=784,333 Gene/SequenceResources]
 
<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=14&beg=1&end=784,333 Gene/SequenceResources]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr14.fsa Download FASTA]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr14.fsa Download FASTA]
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| [http://www.yeastgenome.org/contig/Chromosome_XV/overview XV]   
 
| [http://www.yeastgenome.org/contig/Chromosome_XV/overview XV]   
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<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=15&beg=1&end=1,091,291 Gene/Sequence Resources]
 
<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=15&beg=1&end=1,091,291 Gene/Sequence Resources]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr15.fsa Download FASTA]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr15.fsa Download FASTA]
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| [http://www.yeastgenome.org/contig/Chromosome_XVI/overview XVI]   
 
| [http://www.yeastgenome.org/contig/Chromosome_XVI/overview XVI]   
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<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=16&beg=1&end=948,066 Gene/Sequence Resources]
 
<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=16&beg=1&end=948,066 Gene/Sequence Resources]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr16.fsa Download FASTA]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr16.fsa Download FASTA]
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| [http://www.yeastgenome.org/contig/Chromosome_mito/overview Mitochondrial]
 
| [http://www.yeastgenome.org/contig/Chromosome_mito/overview Mitochondrial]
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<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=Mt&beg=1&end=85,779 Gene/Sequence Resources]
 
<br>[http://www.yeastgenome.org/cgi-bin/seqTools?chr=Mt&beg=1&end=85,779 Gene/Sequence Resources]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chrmt.fsa Download FASTA]
 
<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chrmt.fsa Download FASTA]
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Revision as of 16:45, 15 August 2017

Saccharomyces cerevisiae chromosome statistics and retrieval options

Chromosome Region & Reference DNA Coordinator Total Length S288c sub-strain(s) Retrieve

I
SGD, PubMed, PDF

H. Bussey, Montreal, Canada 230,218 AB972

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

II
SGD, PubMed, PDF

H. Feldmann, Muenchen, Germany 813,184 genuine strain S288C

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

III
SGD, PubMed, PDF

S.G. Oliver, Manchester, England 316,620 XJ24-24a, AB972, A364A, DC5

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

IV
SGD, PubMed, PDF

Telo to Cen: C. Jacq, Paris, France
Cen to 960K: B. Barrell, Cambridge, England
960K to 1110K: M. Johnston, St. Louis, Missouri, USA
1110K to Telo: R. Davis, Stanford, California, USA

1,531,933 AB972

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

V
SGD, PubMed, PDF

R. Davis, Stanford, California, USA 576,874 AB972

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

VI
SGD, PubMed, PDF

Y. Murakami, Tokyo, Japan 270,161 AB972

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

VII
SGD, PubMed, PDF

H. Tettelin, Louvain-la-Neuve, Belgium 1,090,940 FY1679

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

VIII
SGD, PubMed, PDF

M. Johnston, St. Louis, Missouri, USA 562,643 AB972

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

IX
SGD, PubMed, PDF

B. Barrell, Cambridge, England 439,888 AB972

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

X
SGD, PubMed, PDF

F. Galibert, Rouen, France 745,751 FY1679

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

XI
SGD, PubMed, PDF

B. Dujon, Paris, France 666,816 FY1679

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

XII

SGD, PubMed, PDF

Left: J. Hoheisel, Heidelberg, Germany
Right: M. Johnston, St. Louis, Missouri, USA

1,078,177 AB972

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

XIII

SGD, PubMed, PDF

B. Barrell, Cambridge, England 924,431 AB972

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

XIV

SGD, PubMed, PDF

P. Philippsen, Basel, Switzerland 784,333 FY1679, AB972

JBrowse Viewer
Gene/SequenceResources
Download FASTA

XV

SGD, PubMed, PDF

B. Dujon, Paris, France 1,091,291 FY1679

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

XVI

SGD, PubMed, PDF

Left 1: A. Goffeau, Louvain-la-Neuve, Belgium
Left 2: H. Bussey, Montreal, Canada
Left 2a: R. Davis, Stanford, California, USA
Right 1: B. Barrell, Cambridge, England
Right 2: M. Johnston, St. Louis, Missouri, USA

948,066 AB972

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

Mitochondrial

SGD, PubMed, PDF

Foury, Francoise, Unite de Biochimie Physiologique 85,779 FY1679

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

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