Difference between revisions of "Systematic Sequencing Table"

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<br>MIPS
 
<br>MIPS
 
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| V SGD PubMed PDF
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|  
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[http://www.yeastgenome.org/contig/Chromosome_V/overview V]
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<br>[http://www.yeastgenome.org/reference/S000058121/overview SGD]
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<br> [https://www.ncbi.nlm.nih.gov/pubmed/9169868 PubMed]
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<br> [http://www.yeastgenome.org/community/nature_genome_dir_pdf/Chr5.pdf PDF]
 
| R. Davis, Stanford, California, USA
 
| R. Davis, Stanford, California, USA
 
| 576,874
 
| 576,874
 
| [[Commonly_used_strains#AB972 | AB972]]
 
| [[Commonly_used_strains#AB972 | AB972]]
 
|  
 
|  
JBrowse Viewer
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[http://www.yeastgenome.org/browse/?loc=chrV%3A1..576874&tracks=DNA%2CAll%20Annotated%20Sequence%20Features%2CHop1-ChIP-seq%2CRec8-ChIP-seq%2CRed1-ChIP-seq%2CSmc3-ChIP-seq%2COstrow_2014_FKH1_FKH2_binding_sites&highlight= JBrowse Viewer]
 
<br>Gene/SequenceResources
 
<br>Gene/SequenceResources
<br>Dowload FASTA
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<br>[http://downloads.yeastgenome.org/sequence/S288C_reference/NCBI_genome_source/chr05.fsa Dowload FASTA]
 
<br>MIPS
 
<br>MIPS
 
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Revision as of 12:44, 14 August 2017

Saccharomyces cerevisiae chromosome statistics and retrieval options

Chromosome Region & Reference DNA Coordinator Total Length S288c sub-strain(s) Retrieve

I
SGD
PubMed
PDF

H. Bussey, Montreal, Canada 230,218 AB972

JBrowse Viewer
Gene/SequenceResources
Dowload FASTA
MIPS

II
SGD
PubMed
PDF

H. Feldmann, Muenchen, Germany 813,184 genuine strain S288C

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Gene/SequenceResources
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III
SGD
PubMed
PDF

S.G. Oliver, Manchester, England 316,620 XJ24-24a, AB972, A364A, DC5

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Gene/SequenceResources
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MIPS

IV
SGD
PubMed
PDF

Telo to Cen: C. Jacq, Paris, France
Cen to 960K: B. Barrell, Cambridge, England
960K to 1110K: M. Johnston, St. Louis, Missouri, USA
1110K to Telo: R. Davis, Stanford, California, USA

1,531,933 AB972

JBrowse Viewer
Gene/SequenceResources
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MIPS

V
SGD
PubMed
PDF

R. Davis, Stanford, California, USA 576,874 AB972

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Gene/SequenceResources
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MIPS

VI SGD PubMed PDF Y. Murakami, Tokyo, Japan 270,161 AB972

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VII SGD PubMed PDF H. Tettelin, Louvain-la-Neuve, Belgium 1,090,940 FY1679

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VIII SGD PubMed PDF M. Johnston, St. Louis, Missouri, USA 562,643 AB972

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IX SGD PubMed PDF B. Barrell, Cambridge, England 439,888 AB972

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MIPS

X SGD PubMed PDF F. Galibert, Rouen, France 745,751 FY1679

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XI SGD PubMed PDF B. Dujon, Paris, France 666,816 FY1679

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XII SGD PubMed PDF

Left: J. Hoheisel, Heidelberg, Germany
Right: M. Johnston, St. Louis, Missouri, USA

1,078,177 AB972

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XIII SGD PubMed PDF B. Barrell, Cambridge, England 924,431 AB972

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XIV SGD PubMed PDF P. Philippsen, Basel, Switzerland 784,333 FY1679, AB972

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XV SGD PubMed PDF B. Dujon, Paris, France 1,091,291 FY1679

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XVI SGD PubMed PDF

Left 1: A. Goffeau, Louvain-la-Neuve, Belgium
Left 2: H. Bussey, Montreal, Canada
Left 2a: R. Davis, Stanford, California, USA
Right 1: B. Barrell, Cambridge, England
Right 2: M. Johnston, St. Louis, Missouri, USA

948,066 AB972

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Gene/SequenceResources
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MIPS

Mitochondrial SGD PubMed PDF Foury, Francoise, Unite de Biochimie Physiologique 85,779 FY1679

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