Difference between revisions of "Systematic Sequencing Table"

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| H. Bussey, Montreal, Canada
 
| H. Bussey, Montreal, Canada
 
| 230,218
 
| 230,218
−
| [http://wiki.yeastgenome.org/index.php/Commonly_used_strains#AB972 AB972]
+
| [[Commonly_used_strains#AB972 | AB972]]
 
|  
 
|  
 
[http://www.yeastgenome.org/browse/?loc=chrI%3A1..230218&tracks=DNA%2CAll%20Annotated%20Sequence%20Features%2CHop1-ChIP-seq%2CRec8-ChIP-seq%2CRed1-ChIP-seq%2CSmc3-ChIP-seq%2COstrow_2014_FKH1_FKH2_binding_sites&highlight= JBrowse Viewer]
 
[http://www.yeastgenome.org/browse/?loc=chrI%3A1..230218&tracks=DNA%2CAll%20Annotated%20Sequence%20Features%2CHop1-ChIP-seq%2CRec8-ChIP-seq%2CRed1-ChIP-seq%2CSmc3-ChIP-seq%2COstrow_2014_FKH1_FKH2_binding_sites&highlight= JBrowse Viewer]
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| S.G. Oliver, Manchester, England
 
| S.G. Oliver, Manchester, England
 
| 316,620
 
| 316,620
−
| [http://wiki.yeastgenome.org/index.php/Commonly_used_strains#XJ24-24a XJ24-24a], [http://wiki.yeastgenome.org/index.php/Commonly_used_strains#AB972 AB972], [http://wiki.yeastgenome.org/index.php/Commonly_used_strains#A364A A364A], [http://wiki.yeastgenome.org/index.php/Commonly_used_strains#DC5 DC5]
+
| [[Commonly_used_strains#XJ24-24a | XJ24-24a]], [[Commonly_used_strains#AB972 | AB972]], [[Commonly_used_strains#A364A | A364A]], [[Commonly_used_strains#DC5 | DC5]]
 
|  
 
|  
 
[http://www.yeastgenome.org/browse/?loc=chrIII%3A1..316620&tracks=DNA%2CAll%20Annotated%20Sequence%20Features%2CHop1-ChIP-seq%2CRec8-ChIP-seq%2CRed1-ChIP-seq%2CSmc3-ChIP-seq%2COstrow_2014_FKH1_FKH2_binding_sites&highlight= JBrowse Viewer]
 
[http://www.yeastgenome.org/browse/?loc=chrIII%3A1..316620&tracks=DNA%2CAll%20Annotated%20Sequence%20Features%2CHop1-ChIP-seq%2CRec8-ChIP-seq%2CRed1-ChIP-seq%2CSmc3-ChIP-seq%2COstrow_2014_FKH1_FKH2_binding_sites&highlight= JBrowse Viewer]
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<br> ''1110K to Telo'': R. Davis, Stanford, California, USA
 
<br> ''1110K to Telo'': R. Davis, Stanford, California, USA
 
| 1,531,933
 
| 1,531,933
−
| [http://wiki.yeastgenome.org/index.php/Commonly_used_strains#AB972 AB972]
+
| [[Commonly_used_strains#AB972 | AB972]]
 
|  
 
|  
 
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| R. Davis, Stanford, California, USA
 
| R. Davis, Stanford, California, USA
 
| 576,874
 
| 576,874
−
| [http://wiki.yeastgenome.org/index.php/Commonly_used_strains#AB972 AB972]
+
| [[Commonly_used_strains#AB972 | AB972]]
 
|  
 
|  
 
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| Y. Murakami, Tokyo, Japan
 
| Y. Murakami, Tokyo, Japan
 
| 270,161
 
| 270,161
−
| [http://wiki.yeastgenome.org/index.php/Commonly_used_strains#AB972 AB972]
+
| [[Commonly_used_strains#AB972 | AB972]]
 
|  
 
|  
 
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| H. Tettelin, Louvain-la-Neuve, Belgium
 
| H. Tettelin, Louvain-la-Neuve, Belgium
 
| 1,090,940
 
| 1,090,940
−
| [http://wiki.yeastgenome.org/index.php/Commonly_used_strains#FY1679 FY1679]
+
| [[Commonly_used_strains#FY1679 | FY1679]]
 
|  
 
|  
 
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| M. Johnston, St. Louis, Missouri, USA
 
| M. Johnston, St. Louis, Missouri, USA
 
| 562,643
 
| 562,643
−
| [http://wiki.yeastgenome.org/index.php/Commonly_used_strains#AB972 AB972]
+
| [[Commonly_used_strains#AB972 | AB972]]
 
|  
 
|  
 
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| B. Barrell, Cambridge, England
 
| B. Barrell, Cambridge, England
 
| 439,888
 
| 439,888
−
| [http://wiki.yeastgenome.org/index.php/Commonly_used_strains#AB972 AB972]
+
| [[Commonly_used_strains#AB972 | AB972]]
 
|  
 
|  
 
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| F. Galibert, Rouen, France
 
| F. Galibert, Rouen, France
 
| 745,751
 
| 745,751
−
| [http://wiki.yeastgenome.org/index.php/Commonly_used_strains#FY1679 FY1679]
+
| [[Commonly_used_strains#FY1679 | FY1679]]
 
|  
 
|  
 
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| B. Dujon, Paris, France
 
| B. Dujon, Paris, France
 
| 666,816
 
| 666,816
−
| [http://wiki.yeastgenome.org/index.php/Commonly_used_strains#FY1679 FY1679]
+
| [[Commonly_used_strains#FY1679 | FY1679]]
 
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|  
 
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<br>''Right'': M. Johnston, St. Louis, Missouri, USA
 
<br>''Right'': M. Johnston, St. Louis, Missouri, USA
 
| 1,078,177
 
| 1,078,177
−
| [http://wiki.yeastgenome.org/index.php/Commonly_used_strains#AB972 AB972]
+
| [[Commonly_used_strains#AB972 | AB972]]
 
|  
 
|  
 
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| B. Barrell, Cambridge, England
 
| B. Barrell, Cambridge, England
 
| 924,431
 
| 924,431
−
| [http://wiki.yeastgenome.org/index.php/Commonly_used_strains#AB972 AB972]
+
| [[[Commonly_used_strains#AB972 | AB972]]
 
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|  
 
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| P. Philippsen, Basel, Switzerland
 
| P. Philippsen, Basel, Switzerland
 
| 784,333
 
| 784,333
−
| [http://wiki.yeastgenome.org/index.php/Commonly_used_strains#FY1679 FY1679], [http://wiki.yeastgenome.org/index.php/Commonly_used_strains#AB972 AB972]
+
| [[Commonly_used_strains#FY1679 | FY1679]], [[Commonly_used_strains#AB972 | AB972]]
 
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|  
 
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| B. Dujon, Paris, France
 
| B. Dujon, Paris, France
 
| 1,091,291
 
| 1,091,291
−
| [http://wiki.yeastgenome.org/index.php/Commonly_used_strains#FY1679 FY1679]
+
| [[Commonly_used_strains#FY1679 | FY1679]]
 
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<br> ''Right 2'': M. Johnston, St. Louis, Missouri, USA
 
<br> ''Right 2'': M. Johnston, St. Louis, Missouri, USA
 
| 948,066
 
| 948,066
−
| [http://wiki.yeastgenome.org/index.php/Commonly_used_strains#AB972 AB972]
+
| [[Commonly_used_strains#AB972 | AB972]]
 
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| Foury, Francoise, Unite de Biochimie Physiologique
 
| Foury, Francoise, Unite de Biochimie Physiologique
 
| 85,779
 
| 85,779
−
| [http://wiki.yeastgenome.org/index.php/Commonly_used_strains#FY1679 FY1679]
+
| [[Commonly_used_strains#FY1679 | FY1679]]
 
|  
 
|  
 
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Revision as of 12:30, 14 August 2017

Saccharomyces cerevisiae chromosome statistics and retrieval options

Chromosome Region & Reference DNA Coordinator Total Length S288c sub-strain(s) Retrieve

I
SGD
PubMed
PDF

H. Bussey, Montreal, Canada 230,218 AB972

JBrowse Viewer
Gene/SequenceResources
Dowload FASTA
MIPS

II
SGD
PubMed
PDF

H. Feldmann, Muenchen, Germany 813,184 genuine strain S288C

JBrowse Viewer
Gene/SequenceResources
Dowload FASTA
MIPS

III
SGD
PubMed
PDF

S.G. Oliver, Manchester, England 316,620 XJ24-24a, AB972, A364A, DC5

JBrowse Viewer
Gene/SequenceResources
Dowload FASTA
MIPS

IV SGD PubMed PDF

Telo to Cen: C. Jacq, Paris, France
Cen to 960K: B. Barrell, Cambridge, England
960K to 1110K: M. Johnston, St. Louis, Missouri, USA
1110K to Telo: R. Davis, Stanford, California, USA

1,531,933 AB972

JBrowse Viewer
Gene/SequenceResources
Dowload FASTA
MIPS

V SGD PubMed PDF R. Davis, Stanford, California, USA 576,874 AB972

JBrowse Viewer
Gene/SequenceResources
Dowload FASTA
MIPS

VI SGD PubMed PDF Y. Murakami, Tokyo, Japan 270,161 AB972

JBrowse Viewer
Gene/SequenceResources
Dowload FASTA
MIPS

VII SGD PubMed PDF H. Tettelin, Louvain-la-Neuve, Belgium 1,090,940 FY1679

JBrowse Viewer
Gene/SequenceResources
Dowload FASTA
MIPS

VIII SGD PubMed PDF M. Johnston, St. Louis, Missouri, USA 562,643 AB972

JBrowse Viewer
Gene/SequenceResources
Dowload FASTA
MIPS

IX SGD PubMed PDF B. Barrell, Cambridge, England 439,888 AB972

JBrowse Viewer
Gene/SequenceResources
Dowload FASTA
MIPS

X SGD PubMed PDF F. Galibert, Rouen, France 745,751 FY1679

JBrowse Viewer
Gene/SequenceResources
Dowload FASTA
MIPS

XI SGD PubMed PDF B. Dujon, Paris, France 666,816 FY1679

JBrowse Viewer
Gene/SequenceResources
Dowload FASTA
MIPS

XII SGD PubMed PDF

Left: J. Hoheisel, Heidelberg, Germany
Right: M. Johnston, St. Louis, Missouri, USA

1,078,177 AB972

JBrowse Viewer
Gene/SequenceResources
Dowload FASTA
MIPS

XIII SGD PubMed PDF B. Barrell, Cambridge, England 924,431 [[[Commonly_used_strains#AB972 | AB972]]

JBrowse Viewer
Gene/SequenceResources
Dowload FASTA
MIPS

XIV SGD PubMed PDF P. Philippsen, Basel, Switzerland 784,333 FY1679, AB972

JBrowse Viewer
Gene/SequenceResources
Dowload FASTA
MIPS

XV SGD PubMed PDF B. Dujon, Paris, France 1,091,291 FY1679

JBrowse Viewer
Gene/SequenceResources
Dowload FASTA
MIPS

XVI SGD PubMed PDF

Left 1: A. Goffeau, Louvain-la-Neuve, Belgium
Left 2: H. Bussey, Montreal, Canada
Left 2a: R. Davis, Stanford, California, USA
Right 1: B. Barrell, Cambridge, England
Right 2: M. Johnston, St. Louis, Missouri, USA

948,066 AB972

JBrowse Viewer
Gene/SequenceResources
Dowload FASTA
MIPS

Mitochondrial SGD PubMed PDF Foury, Francoise, Unite de Biochimie Physiologique 85,779 FY1679

JBrowse Viewer
Gene/SequenceResources
Dowload FASTA
MIPS

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