Difference between revisions of "Other Fungi"

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=<i>Candida albicans</i> information=
 
=<i>Candida albicans</i> information=
 
*[http://candida.bri.nrc.ca/candida/index.cfm <i>Candida albicans</i> pages] at the NRC/BRI
 
  
 
*[http://www.candidagenome.org/ <i>Candida</i> Genome Database] at Stanford
 
*[http://www.candidagenome.org/ <i>Candida</i> Genome Database] at Stanford
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**[http://sequence-www.stanford.edu/group/C.neoformans/index.html ''Cryptococcus neoformans'' var. ''neoformans'' strain B3501]
 
**[http://sequence-www.stanford.edu/group/C.neoformans/index.html ''Cryptococcus neoformans'' var. ''neoformans'' strain B3501]
 
** [http://compbio.dfci.harvard.edu/cgi-bin/tgi/gimain.pl?gudb=cryptococcus ''Cryptococcus neoformans'' var. ''neoformans'' strain JEC21]
 
** [http://compbio.dfci.harvard.edu/cgi-bin/tgi/gimain.pl?gudb=cryptococcus ''Cryptococcus neoformans'' var. ''neoformans'' strain JEC21]
** ''Cryptococcus neoformans'' var. ''grubii'' H99 - [http://cneo.genetics.duke.edu/ Duke University], [http://www.broadinstitute.org/annotation/genome/cryptococcus_neoformans/MultiHome.html Fungal Genome Initiative]
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** ''Cryptococcus neoformans'' var. ''grubii'' H99 - [http://www.broadinstitute.org/annotation/genome/cryptococcus_neoformans/MultiHome.html Fungal Genome Initiative]
 
** ''Cryptococcus gattii'' R265 - [http://www.broadinstitute.org/annotation/genome/cryptococcus_neoformans_b/MultiHome.html Fungal Genome Initiative]
 
** ''Cryptococcus gattii'' R265 - [http://www.broadinstitute.org/annotation/genome/cryptococcus_neoformans_b/MultiHome.html Fungal Genome Initiative]
 
** ''Cryptococcus gattii'' WM276 - [http://www.bcgsc.ca/project/cryptococcus/ Kronstad Lab/British Columbia Genome Sequencing Centre]
 
** ''Cryptococcus gattii'' WM276 - [http://www.bcgsc.ca/project/cryptococcus/ Kronstad Lab/British Columbia Genome Sequencing Centre]
  
 
* [http://www.broadinstitute.org/annotation/genome/coprinus_cinereus/MultiHome.html ''Coprinus cinereus'']
 
* [http://www.broadinstitute.org/annotation/genome/coprinus_cinereus/MultiHome.html ''Coprinus cinereus'']
* [http://www.broad.mit.edu/annotation/genome/puccinia_graminis ''Puccinia graminis f. sp. tritici'']
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* [http://www.broadinstitute.org/annotation/genome/puccinia_group/MultiHome.html ''Puccinia graminis f. sp. tritici'']
 
* [http://www.broadinstitute.org/annotation/genome/ustilago_maydis/ ''Ustilago maydis''], [http://mips.helmholtz-muenchen.de/genre/proj/ustilago/ MIPS resources].
 
* [http://www.broadinstitute.org/annotation/genome/ustilago_maydis/ ''Ustilago maydis''], [http://mips.helmholtz-muenchen.de/genre/proj/ustilago/ MIPS resources].
  
 
==Archiascomycota==
 
==Archiascomycota==
 
* [http://pgp.cchmc.org/ ''Pneumocystis carinii'']
 
* [http://pgp.cchmc.org/ ''Pneumocystis carinii'']
* [http://www.broad.mit.edu/annotation/genome/schizosaccharomyces_japonicus ''Schizosaccharomyces japonicus'']
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* [http://www.broadinstitute.org/annotation/genome/schizosaccharomyces_group/MultiHome.html ''Schizosaccharomyces japonicus'']
  
 
==Hemiascomycota==
 
==Hemiascomycota==
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*[http://www.aspgd.org/ Aspergillus Genome Database], a database for <i>A. nidulans, A. fumigatus, A. niger</i> and related species.
 
*[http://www.aspgd.org/ Aspergillus Genome Database], a database for <i>A. nidulans, A. fumigatus, A. niger</i> and related species.
 
* [http://cryptogenome.ucsf.edu/ CryptoBase], a scientific database resource at [http://www.ucsf.edu/ UCSF] for ''C. neoformans'' var. ''grubii'' (serotype A)
 
* [http://cryptogenome.ucsf.edu/ CryptoBase], a scientific database resource at [http://www.ucsf.edu/ UCSF] for ''C. neoformans'' var. ''grubii'' (serotype A)
*[http://fungal.genome.duke.edu fungal.genome.duke.edu], a scientific database resource at [http://duke.edu Duke University] providing Genome Browser, BLAST, and downloadable genome annotations for many fungal genomes.
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*[http://fungidb.org/fungidb/ FungiDB], a scientific database resource providing Genome Browser, BLAST, and downloadable genome annotations for many fungal genomes.

Latest revision as of 10:22, 10 June 2013

Schizosaccharomyces pombe information

Candida albicans information

  • CandidaDB, a genomic database for C. albicans, part of the Galar Fungail Consortium project

Links to other fungal information

Fungal genome sequencing projects

Euascomycota

Basidiomycota

Archiascomycota

Hemiascomycota

  • The Génolevures project, featuring partial genomic sequence for 13 Hemiascomycete species

Links

  • There is also list of currently sequenced or in progress fungal genome projects with references.

Fungal genome database projects

  • Aspergillus Genome Database, a database for A. nidulans, A. fumigatus, A. niger and related species.
  • CryptoBase, a scientific database resource at UCSF for C. neoformans var. grubii (serotype A)
  • FungiDB, a scientific database resource providing Genome Browser, BLAST, and downloadable genome annotations for many fungal genomes.